/[MITgcm]/MITgcm_contrib/ecco_darwin/v3_cs510_Brix/readme.txt
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Revision 1.5 - (hide annotations) (download)
Thu Aug 1 02:26:26 2019 UTC (6 years ago) by dimitri
Branch: MAIN
Changes since 1.4: +4 -1 lines
File MIME type: text/plain
fixing name of piclup files in v3 and v3_latest instructions

1 dimitri 1.2 # Build executable for ECCO-Darwin version 3
2     # with circa-2011 MITgcm code, equivalent to
3 dimitri 1.1 # /nobackup/hbrix/MITgcm_110502/build_darwin_p6/mitgcmuv
4    
5     cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "2011-05-12 10:30:47" MITgcm_code
6     cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "2011-05-12 10:30:47" MITgcm_contrib/darwin/pkg/darwin
7     cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_contrib/ecco_darwin/v3_cs510_Brix
8     cd MITgcm/pkg
9     ln -sf ../../MITgcm_contrib/darwin/pkg/darwin .
10     cd ..
11     mkdir build
12     cd build
13     module purge
14     module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
15     ../tools/genmake2 -of \
16     ../../MITgcm_contrib/ecco_darwin/v3_cs510_Brix/code/linux_amd64_ifort+mpi_ice_nas \
17     -mo ../../MITgcm_contrib/ecco_darwin/v3_cs510_Brix/code
18     make depend
19     make -j 16
20    
21     ==============
22     # Instructions for running Version 3 (cg1) to 2009-2013.
23    
24 dimitri 1.3 cd ..
25 dimitri 1.1 mkdir run
26     cd run
27     ln -sf ../build/mitgcmuv .
28     cp ../../MITgcm_contrib/ecco_darwin/v3_cs510_Brix/input/* .
29     ln -sf ~dmenemen/CMS/run_template_cg1/darwin* .
30     ln -sf ~dmenemen/CMS/run_template_cg1/DIFFKR_2_20_1_lat6070_cube81 .
31     ln -sf /nobackup/hzhang1/cs510/run_template/GEBCO_510x6x510_ver06_dig.bin .
32     ln -sf /nobackup/hzhang1/forcing/jra25/jra25_dlw* .
33     ln -sf /nobackup/hzhang1/cs510/ICBC_2009_iter26/jra25_xx_* .
34     ln -sf /nobackup/hbrix/ICBC/pco2a_blended_* .
35     ln -sf pco2a_blended_2012 pco2a_blended_2013
36     ln -sf pco2a_blended_2012 pco2a_blended_2014
37 dimitri 1.4 ln -sf /nobackup/hzhang1/cs510/ICBC_2009_iter26/pickup.0000000001.data_xx pickup.0000078912.data
38     ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup.0000000001.meta pickup.0000078912.meta
39     ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup_seaice.0000000001.data pickup_seaice.0000078912.data
40     ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup_seaice.0000000001.meta pickup_seaice.0000078912.meta
41 dimitri 1.5 ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_dic.gf_cg1.0000078912.data pickup_dic.0000078912.data
42     ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_dic.gf_cg1.0000078912.meta pickup_dic.0000078912.meta
43     ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_ptracers.gf_cg1.0000078912.data pickup_ptracers.0000078912.data
44     ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_ptracers.gf_cg1.0000078912.meta pickup_ptracers.0000078912.meta
45 dimitri 1.1 ln -sf /nobackup/dmenemen/forcing/runoff/runoff-360x180x12.bin .
46     ln -sf /nobackup/hzhang1/cs510/run_template/tile00* .
47    
48     # modify run_darwin_450 as needed
49     qsub run_darwin_450

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