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dimitri |
1.2 |
# Build executable for ECCO-Darwin version 3 |
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# with circa-2011 MITgcm code, equivalent to |
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dimitri |
1.1 |
# /nobackup/hbrix/MITgcm_110502/build_darwin_p6/mitgcmuv |
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dcarroll |
1.6 |
# Note: this version has different ICs from V2 and |
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# uses a linear piston velocity formulation. The improved |
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# V3 air-sea CO2 flux uptake, both globally and in the Southern Ocean, |
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# results primarily from changing the piston velocity formulation |
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# from quadratic to linear. By implementing various bug fixes and adjusted |
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# ICs, we were able to return to the quadratic formulation in V4. |
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dimitri |
1.1 |
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cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "2011-05-12 10:30:47" MITgcm_code |
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cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "2011-05-12 10:30:47" MITgcm_contrib/darwin/pkg/darwin |
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cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_contrib/ecco_darwin/v3_cs510_Brix |
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cd MITgcm/pkg |
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ln -sf ../../MITgcm_contrib/darwin/pkg/darwin . |
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cd .. |
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mkdir build |
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cd build |
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module purge |
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module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt |
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../tools/genmake2 -of \ |
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../../MITgcm_contrib/ecco_darwin/v3_cs510_Brix/code/linux_amd64_ifort+mpi_ice_nas \ |
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-mo ../../MITgcm_contrib/ecco_darwin/v3_cs510_Brix/code |
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make depend |
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make -j 16 |
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============== |
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# Instructions for running Version 3 (cg1) to 2009-2013. |
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dimitri |
1.3 |
cd .. |
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dimitri |
1.1 |
mkdir run |
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cd run |
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ln -sf ../build/mitgcmuv . |
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cp ../../MITgcm_contrib/ecco_darwin/v3_cs510_Brix/input/* . |
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ln -sf ~dmenemen/CMS/run_template_cg1/darwin* . |
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ln -sf ~dmenemen/CMS/run_template_cg1/DIFFKR_2_20_1_lat6070_cube81 . |
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ln -sf /nobackup/hzhang1/cs510/run_template/GEBCO_510x6x510_ver06_dig.bin . |
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ln -sf /nobackup/hzhang1/forcing/jra25/jra25_dlw* . |
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ln -sf /nobackup/hzhang1/cs510/ICBC_2009_iter26/jra25_xx_* . |
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ln -sf /nobackup/hbrix/ICBC/pco2a_blended_* . |
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ln -sf pco2a_blended_2012 pco2a_blended_2013 |
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ln -sf pco2a_blended_2012 pco2a_blended_2014 |
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dimitri |
1.4 |
ln -sf /nobackup/hzhang1/cs510/ICBC_2009_iter26/pickup.0000000001.data_xx pickup.0000078912.data |
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ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup.0000000001.meta pickup.0000078912.meta |
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ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup_seaice.0000000001.data pickup_seaice.0000078912.data |
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ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup_seaice.0000000001.meta pickup_seaice.0000078912.meta |
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dimitri |
1.5 |
ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_dic.gf_cg1.0000078912.data pickup_dic.0000078912.data |
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ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_dic.gf_cg1.0000078912.meta pickup_dic.0000078912.meta |
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ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_ptracers.gf_cg1.0000078912.data pickup_ptracers.0000078912.data |
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ln -sf /nobackup/hbrix/ICBC/pickup_greensf/pickup_ptracers.gf_cg1.0000078912.meta pickup_ptracers.0000078912.meta |
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dimitri |
1.1 |
ln -sf /nobackup/dmenemen/forcing/runoff/runoff-360x180x12.bin . |
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ln -sf /nobackup/hzhang1/cs510/run_template/tile00* . |
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# modify run_darwin_450 as needed |
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qsub run_darwin_450 |
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