| 1 |
# Diagnostic Package Choices |
# Diagnostic Package Choices |
| 2 |
#-------------------- |
#----------------- |
| 3 |
# dumpAtLast (logical): always write output at the end of simulation (default=F) |
# for each output-stream: |
| 4 |
# diag_mnc (logical): write to NetCDF files (default=useMNC) |
# filename(n) : prefix of the output file name (only 8.c long) for outp.stream n |
| 5 |
#--for each output-stream: |
# frequency(n):< 0 : write snap-shot output every multiple of |frequency| (iter) |
| 6 |
# fileName(n) : prefix of the output file name (max 80c long) for outp.stream n |
# > 0 : write time-average output every multiple of frequency (iter) |
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# frequency(n):< 0 : write snap-shot output every |frequency| seconds |
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# > 0 : write time-average output every frequency seconds |
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# timePhase(n) : write at time = timePhase + multiple of |frequency| |
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# averagingFreq : frequency (in s) for periodic averaging interval |
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# averagingPhase : phase (in s) for periodic averaging interval |
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# repeatCycle : number of averaging intervals in 1 cycle |
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| 7 |
# levels(:,n) : list of levels to write to file (Notes: declared as REAL) |
# levels(:,n) : list of levels to write to file (Notes: declared as REAL) |
| 8 |
# when this entry is missing, select all common levels of this list |
# when this entry is missing, select all common levels of this list |
| 9 |
# fields(:,n) : list of selected diagnostics fields (8.c) in outp.stream n |
# fields(:,n) : list of diagnostics fields (8.c) (see "available_diagnostics" file |
| 10 |
# (see "available_diagnostics.log" file for the full list of diags) |
# for the list of all available diag. in this particular config) |
| 11 |
# missing_value(n) : missing value for real-type fields in output file "n" |
#-------------------------------------------------------------------- |
| 12 |
# fileFlags(n) : specific code (8c string) for output file "n" |
# |
| 13 |
#-------------------- |
&diagnostics_list |
| 14 |
&DIAGNOSTICS_LIST |
# |
| 15 |
fields(1:10,1) = 'ETAN ','ETANSQ ','DETADT2 ','PHIBOT ','PHIBOTSQ', |
dumpatlast = .TRUE., |
| 16 |
'DICTFLX ','DICOFLX ','DICCFLX ','DICPCO2 ','DICPHAV ', |
#--- |
| 17 |
levels(1,1) = 1., |
frequency(1) = 2635200.0, |
| 18 |
fileName(1) = 'surfDiag', |
fields(1:25,1) = 'ETAN ','SIarea ','SIheff ','SIhsnow ', |
| 19 |
frequency(1) = 432000., |
#stuff that is not quite state variables (and may not be quite |
| 20 |
frequency(1) = 172800., |
#synchroneous) but are added here to reduce number of files |
| 21 |
fields(1:18,2) = 'UVEL ','VVEL ','WVEL ','PHIHYD ', |
'DETADT2 ','PHIBOT ','sIceLoad', |
| 22 |
'UVELMASS','VVELMASS', |
'MXLDEPTH','oceSPDep', |
| 23 |
'UVELSQ ','VVELSQ ','UV_VEL_C','THETASQ ', |
'SIatmQnt','SIatmFW ','oceQnet ','oceFWflx', |
| 24 |
'THETA ','UTHMASS ','VTHMASS ','WVELTH ', |
'oceTAUX ','oceTAUY ', |
| 25 |
'SALT ','USLTMASS','VSLTMASS','WVELSLT ', |
'ADVxHEFF','ADVyHEFF','DFxEHEFF','DFyEHEFF', |
| 26 |
# fileName(2) = 'dynDiag', |
'ADVxSNOW','ADVySNOW','DFxESNOW','DFyESNOW', |
| 27 |
frequency(2) = 0., |
'SIuice ','SIvice ', |
| 28 |
fields(1:5,3) = 'DICBIOA ','DICCARB ', |
filename(1) = 'diags/state_2d_set1', |
| 29 |
'TRAC05 ','ADVxTr05','DFrITr05', |
#--- |
| 30 |
# fileName(3) = 'dicDiag', |
frequency(2) = 2635200.0, |
| 31 |
frequency(3) = 172800., |
fields(1:3,2) = 'THETA ','SALT ', |
| 32 |
fields(1:8,4) = 'ADVx_TH ','ADVy_TH ','ADVr_TH ', |
#stuff that is not quite state variables (and may not be quite |
| 33 |
'DFxE_TH ','DFyE_TH ','DFrE_TH ', |
#synchronous) but are added here to reduce file number |
| 34 |
'DFrI_TH ', |
'DRHODR ', |
| 35 |
'ADVx_SLT', |
# 'KPPviscA','KPPdiffT','KPPdiffTS', |
| 36 |
# fileName(4) = 'flxDiag', |
# 'GGL90TKE','GGL90Lmx','GGL90Prl', |
| 37 |
frequency(4) = 0., |
# 'GGL90ArU','GGL90ArV','GGL90Kr ', |
| 38 |
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filename(2) = 'diags/state_3d_set1', |
| 39 |
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#--- |
| 40 |
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frequency(3) = 2635200.0, |
| 41 |
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fields(1:5,3) = 'UVELMASS','VVELMASS','WVELMASS', |
| 42 |
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'GM_PsiX ','GM_PsiY ', |
| 43 |
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#uvel is approximately uvelmass divided by initial hfac, so we dont output the former |
| 44 |
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# 'UVEL ','VVEL ','WVEL ', |
| 45 |
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#full 3D temperature fluxes : 'DFxE_TH ','DFyE_TH ','DFrE_TH ','DFrI_TH ','ADVx_TH ','ADVy_TH ','ADVr_TH ', |
| 46 |
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#but for present computations I only need the vertically integrated horizontal components (see trsp_3d_set2) |
| 47 |
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filename(3) = 'diags/trsp_3d_set1', |
| 48 |
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#--- |
| 49 |
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frequency(4) = 2635200.0, |
| 50 |
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fields(1:8,4) = 'DFxE_TH ','DFyE_TH ','ADVx_TH ','ADVy_TH ', |
| 51 |
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'DFxE_SLT','DFyE_SLT','ADVx_SLT','ADVy_SLT', |
| 52 |
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filename(4) = 'diags/trsp_3d_set2', |
| 53 |
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#vertically integrate fields we only use to compute vertically integr. |
| 54 |
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#meridional transports (also omit vertical transports, both to save space) |
| 55 |
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#--- |
| 56 |
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frequency(5) = -2635200.0, |
| 57 |
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fields(1:6,5) = 'ETAN ','SIheff ','SIhsnow ', |
| 58 |
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'SIarea ','sIceLoad','PHIBOT ', |
| 59 |
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filename(5) = 'diags/budg2d_snap_set1', |
| 60 |
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timePhase(5)= 0., |
| 61 |
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fileFlags(5) = 'D ', |
| 62 |
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#--- |
| 63 |
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frequency(6) = -2635200.0, |
| 64 |
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fields(1:2,6) = 'THETA ','SALT ', |
| 65 |
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filename(6) = 'diags/budg2d_snap_set2', |
| 66 |
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timePhase(6)= 0., |
| 67 |
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fileFlags(6) = 'DI ', |
| 68 |
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#--- |
| 69 |
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frequency(7) = 2635200.0, |
| 70 |
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fields(1:8,7) = 'oceFWflx','SIatmFW ','TFLUX ','SItflux ', |
| 71 |
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'SFLUX ','oceQsw ','oceSPflx','DICTFLX ', |
| 72 |
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filename(7) = 'diags/budg2d_zflux_set1', |
| 73 |
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fileFlags(7) = 'D ', |
| 74 |
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#--- |
| 75 |
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frequency(8) = 2635200.0, |
| 76 |
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fields(1:13,8) ='UVELMASS','VVELMASS', |
| 77 |
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'ADVx_TH ','ADVy_TH ','DFxE_TH ','DFyE_TH ', |
| 78 |
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'ADVx_SLT','ADVy_SLT','DFxE_SLT','DFyE_SLT', |
| 79 |
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#the following are not transports but tendencies |
| 80 |
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'oceSPtnd','AB_gT ','AB_gS ', |
| 81 |
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filename(8) = 'diags/budg2d_hflux_set2', |
| 82 |
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fileFlags(8) = 'DI ', |
| 83 |
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#--- |
| 84 |
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frequency(9) = 2635200.0, |
| 85 |
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fields(1:8,9) ='ADVxHEFF','ADVyHEFF','DFxEHEFF','DFyEHEFF', |
| 86 |
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'ADVxSNOW','ADVySNOW','DFxESNOW','DFyESNOW', |
| 87 |
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filename(9) = 'diags/budg2d_hflux_set1', |
| 88 |
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fileFlags(9) = 'D ', |
| 89 |
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#--- |
| 90 |
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# this one is important because it activates the vertical advection diags |
| 91 |
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# frequency(10) = 2635200.0, |
| 92 |
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# fields(1:7,10) = 'ADVr_TH ','DFrE_TH ','DFrI_TH ', |
| 93 |
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# 'ADVr_SLT','DFrE_SLT','DFrI_SLT', |
| 94 |
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# 'WVELMASS', |
| 95 |
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# filename(10) = 'diags/budg2d_zflux_set3_11', |
| 96 |
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# levels(1, 10)= 11., |
| 97 |
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# fileFlags(10) = 'D ', |
| 98 |
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#--- |
| 99 |
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frequency(11) = 2635200.0, |
| 100 |
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fields(1:10,11) ='SRELAX ','TRELAX ','WTHMASS ','WSLTMASS', |
| 101 |
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'oceSflux','oceQnet ','SIatmQnt', |
| 102 |
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'SIaaflux','SIsnPrcp','SIacSubl', |
| 103 |
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filename(11) = 'diags/budg2d_zflux_set2', |
| 104 |
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fileFlags(11) = 'D ', |
| 105 |
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#--- |
| 106 |
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# frequency(12) = 2635200.0, |
| 107 |
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# fields(1:13,12) ='UVELMASS','VVELMASS', |
| 108 |
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# 'ADVx_TH ','ADVy_TH ','DFxE_TH ','DFyE_TH ', |
| 109 |
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# 'ADVx_SLT','ADVy_SLT','DFxE_SLT','DFyE_SLT', |
| 110 |
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# 'oceSPtnd','AB_gT ','AB_gS ', |
| 111 |
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# filename(12) = 'diags/budg2d_hflux_set3_11', |
| 112 |
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# levels(1:40,12) = 11.,12.,13.,14.,15.,16.,17.,18.,19.,20., |
| 113 |
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# 21.,22.,23.,24.,25.,26.,27.,28.,29.,30., |
| 114 |
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# 31.,32.,33.,34.,35.,36.,37.,38.,39.,40., |
| 115 |
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# 41.,42.,43.,44.,45.,46.,47.,48.,49.,50., |
| 116 |
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# fileFlags(12) = 'DI ', |
| 117 |
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#--- |
| 118 |
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# frequency(13) = -2635200.0, |
| 119 |
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# fields(1:2,13) = 'THETA ','SALT ', |
| 120 |
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# filename(13) = 'diags/budg2d_snap_set3_11', |
| 121 |
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# timePhase(13)= 0., |
| 122 |
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# levels(1:40,13) = 11.,12.,13.,14.,15.,16.,17.,18.,19.,20., |
| 123 |
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# 21.,22.,23.,24.,25.,26.,27.,28.,29.,30., |
| 124 |
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# 31.,32.,33.,34.,35.,36.,37.,38.,39.,40., |
| 125 |
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# 41.,42.,43.,44.,45.,46.,47.,48.,49.,50., |
| 126 |
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# fileFlags(13) = 'DI ', |
| 127 |
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#--- |
| 128 |
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frequency(14) = 2635200.0, |
| 129 |
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fields(1:8,14) = 'DFxE_TH ','DFyE_TH ','ADVx_TH ','ADVy_TH ', |
| 130 |
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'DFxE_SLT','DFyE_SLT','ADVx_SLT','ADVy_SLT', |
| 131 |
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filename(14) = 'diags/trsp_2d_set1', |
| 132 |
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#vertically integrate fields we only use to compute vertically integr. |
| 133 |
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#meridional transports (also omit vertical transports, both to save space) |
| 134 |
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fileFlags(14) = ' I ', |
| 135 |
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#--- |
| 136 |
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frequency(15) = 2635200.0, |
| 137 |
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fields(1:3,15) = 'RHOAnoma','PHIHYD ','oceSPtnd', |
| 138 |
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filename(15) = 'diags/state_3d_set2', |
| 139 |
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#--- |
| 140 |
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frequency(16) = 2635200.0, |
| 141 |
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fields(1:7,16) = 'ADVr_TH ','DFrE_TH ','DFrI_TH ', |
| 142 |
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'ADVr_SLT','DFrE_SLT','DFrI_SLT','WVELMASS', |
| 143 |
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filename(16) = 'diags/trsp_3d_set3', |
| 144 |
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#--- |
| 145 |
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frequency(17) = 2635200.0, |
| 146 |
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fields(1:7,17) = 'TFLUX ','SItflux ','SFLUX ', |
| 147 |
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'oceQsw ','oceSPflx','SIsnPrcp','SIacSubl', |
| 148 |
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filename(17) = 'diags/state_2d_set2', |
| 149 |
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#--- |
| 150 |
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frequency(18) = -2635200.0, |
| 151 |
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fields(1:2,18) = 'SALT ','TRAC32 ', |
| 152 |
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timePhase(18)= 0., |
| 153 |
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filename(18) = 'diags/state_3d_snap_set1', |
| 154 |
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#--- |
| 155 |
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frequency(19) = 2635200.0, |
| 156 |
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fields(1:8,19) = 'TRAC32 ','ADVxTr32','ADVyTr32','ADVrTr32', |
| 157 |
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'DFxETr32','DFyETr32','DFrETr32','DFrITr32', |
| 158 |
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filename(19) = 'diags/dic_physics', |
| 159 |
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#--- |
| 160 |
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frequency(20) = 2635200.0, |
| 161 |
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fields(1:5,20) = 'BCDIC ','BCDICPIC','BREMIND ', |
| 162 |
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'BREMINP ','DISSCPIC', |
| 163 |
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filename(20) = 'diags/dic_biology', |
| 164 |
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#--- |
| 165 |
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filename(21) = 'diags/CO2_FLUX_BUDGET_DEPTH', |
| 166 |
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frequency(21) = 2635200.0, |
| 167 |
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fields(1,21) = 'TRAC32 ','THETA ','SALT ', |
| 168 |
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'TRAC36 ','TRAC01 ','TRAC04 ', |
| 169 |
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#--- |
| 170 |
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filename(22) = 'diags/CO2_FLUX_BUDGET_SURF', |
| 171 |
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frequency(22) = 2635200.0, |
| 172 |
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levels(1,22) = 1., |
| 173 |
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fields(1,22) = 'DICCFLX ','DICTFLX ', |
| 174 |
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# 'DICPCO2 ','EXFapco2', |
| 175 |
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| 176 |
& |
& |
| 177 |
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| 178 |
#-------------------- |
/ |
| 179 |
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# |
| 180 |
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# |
| 181 |
# Parameter for Diagnostics of per level statistics: |
# Parameter for Diagnostics of per level statistics: |
| 182 |
#-------------------- |
#----------------- |
| 183 |
# diagSt_mnc (logical): write stat-diags to NetCDF files (default=diag_mnc) |
# for each output-stream: |
| 184 |
# diagSt_regMaskFile : file containing the region-mask to read-in |
# stat_fname(n) : prefix of the output file name (only 8.c long) for outp.stream n |
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# nSetRegMskFile : number of region-mask sets within the region-mask file |
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# set_regMask(i) : region-mask set-index that identifies the region "i" |
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# val_regMask(i) : region "i" identifier value in the region mask |
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#--for each output-stream: |
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# stat_fName(n) : prefix of the output file name (max 80c long) for outp.stream n |
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| 185 |
# stat_freq(n):< 0 : write snap-shot output every |stat_freq| seconds |
# stat_freq(n):< 0 : write snap-shot output every |stat_freq| seconds |
| 186 |
# > 0 : write time-average output every stat_freq seconds |
# > 0 : write time-average output every stat_freq seconds |
| 187 |
# stat_phase(n) : write at time = stat_phase + multiple of |stat_freq| |
# stat_phase(n) : write at time = stat_phase + multiple of |stat_freq| |
| 188 |
# stat_region(:,n) : list of "regions" (default: 1 region only=global) |
# stat_region(:,n) : list of "regions" (default: 1 region only=global) |
| 189 |
# stat_fields(:,n) : list of selected diagnostics fields (8.c) in outp.stream n |
# stat_fields(:,n) : list of diagnostics fields (8.c) (see "available_diagnostics.log" |
| 190 |
# (see "available_diagnostics.log" file for the full list of diags) |
# file for the list of all available diag. in this particular config) |
| 191 |
#-------------------- |
#----------------- |
| 192 |
&DIAG_STATIS_PARMS |
&DIAG_STATIS_PARMS |
| 193 |
#- an example just to check the agreement with MONITOR output: |
# diagSt_regMaskFile='basin_masks_eccollc_90x50.bin', |
| 194 |
#stat_fields(1:5,1) = 'ETAN ','UVEL ','VVEL ','WVEL ', 'THETA ', |
# nSetRegMskFile=1, |
| 195 |
# stat_fName(1) = 'dynStDiag', |
# set_regMask(1)= 1, 1, 1, 1, 1, 1, 1, 1, 1, |
| 196 |
# stat_freq(1) = -864000., |
# 1, 1, 1, 1, 1, 1, 1, 1 |
| 197 |
# stat_phase(1) = 0., |
# val_regMask(1)= 1., 2., 3., 4., 5., 6., 7., 8., 9., |
| 198 |
& |
# 10.,11.,12.,13.,14.,15.,16.,17. |
| 199 |
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##--- |
| 200 |
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# stat_fields(1,1)= 'ETAN ','ETANSQ ','DETADT2 ', |
| 201 |
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# 'UVEL ','VVEL ','WVEL ', |
| 202 |
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# 'THETA ','SALT ', |
| 203 |
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# stat_fname(1)= 'dynStDiag', |
| 204 |
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# stat_freq(1)= 3153600., |
| 205 |
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# stat_region(1,1)= 1, 2, 3, 4, 5, 6, 7, 8, 9, |
| 206 |
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# 10,11,12,13,14,15,16,17 |
| 207 |
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##--- |
| 208 |
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# stat_fields(1,2)= 'oceTAUX ','oceTAUY ', |
| 209 |
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# 'surForcT','surForcS','TFLUX ','SFLUX ', |
| 210 |
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# 'oceQnet ','oceSflux','oceFWflx', |
| 211 |
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# stat_fname(2)= 'surfStDiag', |
| 212 |
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# stat_freq(2)= 3153600., |
| 213 |
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# stat_region(1,2)= 1, 2, 3, 4, 5, 6, 7, 8, 9, |
| 214 |
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# 10,11,12,13,14,15,16,17 |
| 215 |
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