/[MITgcm]/MITgcm_contrib/ecco_darwin/v4_llc270/readme_darwin.txt
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Revision 1.2 - (hide annotations) (download)
Fri Dec 1 21:19:03 2017 UTC (7 years, 8 months ago) by dimitri
Branch: MAIN
Changes since 1.1: +17 -23 lines
File MIME type: text/plain
updates to instructions

1 dimitri 1.1 # Build executable for ECCO-Darwin version 4
2     cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_code
3     cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_contrib/darwin/pkg/darwin
4     cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_contrib/ecco_darwin/v4_llc270
5     cd MITgcm/pkg
6     ln -sf ../../MITgcm_contrib/darwin/pkg/darwin .
7     cd ..
8     mkdir build
9     cd build
10     module purge
11     module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
12     ../tools/genmake2 -of \
13 dimitri 1.2 ../../MITgcm_contrib/ecco_darwin/v4_llc270/code/linux_amd64_ifort+mpi_ice_nas \
14     -mo ../../MITgcm_contrib/ecco_darwin/v4_llc270/code \
15     -mo ../../MITgcm_contrib/ecco_darwin/v4_llc270/code_darwin
16 dimitri 1.1 make depend
17     make -j 16
18    
19    
20     ==============
21 dimitri 1.2 # Instructions for running ECCO-Darwin Version 4 for 2009-2015 period
22 dimitri 1.1 cd ..
23     mkdir run
24     cd run
25     ln -sf ../build/mitgcmuv .
26     cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* .
27 dimitri 1.2 cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input_darwin/* .
28 dimitri 1.1 cp data_2009 data
29     cp data.ctrl_2009 data.ctrl
30     ln -sf /nobackup/hzhang1/obs/input/bathy270_filled_noCaspian_r4 .
31     ln -sf /nobackup/hzhang1/forcing/era_xx .
32     ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/20090101/pickup* .
33     ln -sf /nobackup/hzhang1/obs/input/runoff-2d-Fekete-1deg-mon-V4-SMOOTH.bin .
34     ln -sf /nobackup/hzhang1/obs/pri_err/smooth* .
35     ln -sf /nobackup/hzhang1/obs/input/tile* .
36     ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/w*data .
37     ln -sf /nobackup/hzhang1/obs/optim33/xx_* .
38 dimitri 1.2 ln -sf /nobackup/hbrix/ICBC/pco2a_blended_* .
39     ln -sf pco2a_blended_2012 pco2a_blended_2013
40     ln -sf pco2a_blended_2012 pco2a_blended_2014
41     ln -sf pco2a_blended_2012 pco2a_blended_2015
42     ln -sf pco2a_blended_2012 pco2a_blended_2016
43     ln -sf ~dmenemen/CMS/run_template_cg1/darwin* .
44     ln -sf /nobackup/dcarrol2/temp/pickup_llc270_dic.gf_cg1.0000078912.data pickup_dic.0000078912.data
45     ln -sf /nobackup/dcarrol2/temp/pickup_llc270_ptracers.gf_cg1.0000078912.data pickup_ptracers.0000078912.data
46     ln -sf /nobackup/dcarrol2/temp/pickup*.meta .
47     ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup*.0000000001.??ta .
48     ln -sf /nobackup/dmenemen/forcing/runoff/runoff-360x180x12.bin .
49     ln -sf /nobackup/hzhang1/cs510/run_template/tile00* .
50 dimitri 1.1 # modify job_llc270_fdH as needed
51     qsub job_llc270_fdH

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