| 1 |
dimitri |
1.1 |
# Build executable for ECCO-Darwin version 4 |
| 2 |
dimitri |
1.7 |
cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "11/28/17" MITgcm_code |
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cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "03/22/18" MITgcm_contrib/darwin/pkg/darwin |
| 4 |
dimitri |
1.1 |
cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_contrib/ecco_darwin/v4_llc270 |
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cd MITgcm/pkg |
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ln -sf ../../MITgcm_contrib/darwin/pkg/darwin . |
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cd .. |
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mkdir build |
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cd build |
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module purge |
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module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt |
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../tools/genmake2 -of \ |
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dimitri |
1.3 |
../../MITgcm_contrib/ecco_darwin/v4_llc270/code/linux_amd64_ifort+mpi_ice_nas -mo \ |
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'../../MITgcm_contrib/ecco_darwin/v4_llc270/code_darwin ../../MITgcm_contrib/ecco_darwin/v4_llc270/code' |
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dimitri |
1.1 |
make depend |
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make -j 16 |
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============== |
| 20 |
dimitri |
1.2 |
# Instructions for running ECCO-Darwin Version 4 for 2009-2015 period |
| 21 |
dimitri |
1.1 |
cd .. |
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mkdir run |
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cd run |
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ln -sf ../build/mitgcmuv . |
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cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* . |
| 26 |
dimitri |
1.2 |
cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input_darwin/* . |
| 27 |
dimitri |
1.1 |
cp data_2009 data |
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cp data.ctrl_2009 data.ctrl |
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ln -sf /nobackup/hzhang1/obs/input/bathy270_filled_noCaspian_r4 . |
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ln -sf /nobackup/hzhang1/forcing/era_xx . |
| 31 |
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ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/20090101/pickup* . |
| 32 |
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ln -sf /nobackup/hzhang1/obs/input/runoff-2d-Fekete-1deg-mon-V4-SMOOTH.bin . |
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ln -sf /nobackup/hzhang1/obs/pri_err/smooth* . |
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ln -sf /nobackup/hzhang1/obs/input/tile* . |
| 35 |
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ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/w*data . |
| 36 |
dimitri |
1.8 |
ln -sf /nobackup/hzhang1/obs/optim42/xx_* . |
| 37 |
dimitri |
1.2 |
ln -sf /nobackup/hbrix/ICBC/pco2a_blended_* . |
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ln -sf pco2a_blended_2012 pco2a_blended_2013 |
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ln -sf pco2a_blended_2012 pco2a_blended_2014 |
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ln -sf pco2a_blended_2012 pco2a_blended_2015 |
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ln -sf pco2a_blended_2012 pco2a_blended_2016 |
| 42 |
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ln -sf ~dmenemen/CMS/run_template_cg1/darwin* . |
| 43 |
dimitri |
1.4 |
ln -sf /nobackup/dcarrol2/temp/pickup_llc270_dic.gf_cg1.0000078912.data pickup_dic.0000210384.data |
| 44 |
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ln -sf /nobackup/dcarrol2/temp/pickup_llc270_ptracers.gf_cg1.0000078912.data pickup_ptracers.0000210384.data |
| 45 |
dimitri |
1.2 |
ln -sf /nobackup/dcarrol2/temp/pickup*.meta . |
| 46 |
dcarroll |
1.6 |
ln -sf /nobackup/dcarrol2/forcing/iron_dust/llc270_Mahowald_2009_soluble_iron_dust.bin |
| 47 |
dimitri |
1.1 |
# modify job_llc270_fdH as needed |
| 48 |
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qsub job_llc270_fdH |
| 49 |
dcarroll |
1.5 |
|
| 50 |
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============== |
| 51 |
dimitri |
1.8 |
# Instructions for running ECCO-Darwin Version 4 for 1992-2018 period |
| 52 |
dcarroll |
1.5 |
cd .. |
| 53 |
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mkdir run |
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cd run |
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ln -sf ../build/mitgcmuv . |
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ln -sf /nobackup/hzhang1/obs/input/bathy270_filled_noCaspian_r4 . |
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ln -sf /nobackup/hzhang1/forcing/era_xx . |
| 58 |
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ln -sf /nobackup/hzhang1/obs/input/pickup* . |
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ln -sf /nobackup/hzhang1/obs/input/runoff-2d-Fekete-1deg-mon-V4-SMOOTH.bin . |
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ln -sf /nobackup/hzhang1/obs/pri_err/smooth* . |
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ln -sf /nobackup/hzhang1/obs/input/tile* . |
| 62 |
dimitri |
1.8 |
ln -sf /nobackup/hzhang1/obs/optim42/xx_* . |
| 63 |
dcarroll |
1.6 |
cp -sf /nobackup/hzhang1/pub/llc270_FWD/input/* . |
| 64 |
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cp -sf /nobackup/hzhang1/pub/llc270_FWD/input/19920101/* . |
| 65 |
dcarroll |
1.5 |
cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* . |
| 66 |
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cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input_darwin/* . |
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ln -sf ~dmenemen/CMS/run_template_cg1/darwin* . |
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ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/19920101/pickup.0000000001.meta pickup.0000000001.meta |
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ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/19920101/pickup.0000000001.data pickup.0000000001.data |
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ln -sf /nobackup/dcarrol2/temp/pickup_llc270_ptracers.gf_cg1.0000078912.data pickup_ptracers.0000000001.data |
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ln -sf /nobackup/dcarrol2/temp/pickup_ptracers.0000210384.meta pickup_ptracers.0000000001.meta |
| 72 |
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ln -sf /nobackup/dcarrol2/temp/pickup_llc270_dic.gf_cg1.0000078912.data pickup_dic.0000000001.data |
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ln -sf /nobackup/dcarrol2/temp/pickup_dic.0000210384.meta pickup_dic.0000000001.meta |
| 74 |
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ln -sf /nobackup/dcarrol2/forcing/apCO2/apCO2* . |
| 75 |
dcarroll |
1.6 |
ln -sf /nobackup/dcarrol2/forcing/iron_dust/llc270_Mahowald_2009_soluble_iron_dust.bin |
| 76 |
dimitri |
1.8 |
ln -sf /nobackup/dcarrol2/adjustment/xx* . |
| 77 |
dcarroll |
1.5 |
# modify job_llc270_fdH as needed |
| 78 |
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qsub job_llc270_fdH |
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