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dimitri |
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# Instructions for llc270 ECCO-Darwin simulation |
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# Instructions are specific to pleiades and need to be adjusted for other platforms |
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# iter42/input is available at https://data.nas.nasa.gov/ecco/data.php?dir=/eccodata/llc_270/iter42/input |
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# ecco_darwin_v4/input is available at https://data.nas.nasa.gov/ecco/data.php?dir=/eccodata/llc_270/ecco_darwin_v4/input |
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# forcing/era_xx is available at https://ecco.jpl.nasa.gov/drive/files/Version5 |
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dcarroll |
1.1 |
============== |
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# Build executable for ECCO-Darwin version 4 |
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dimitri |
1.2 |
cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "11/28/17" MITgcm_code |
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cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co MITgcm_contrib/ecco_darwin/v4_llc270 |
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cvs -d :pserver:cvsanon:cvsanon@mitgcm.org:/u/gcmpack co -D "03/22/18" MITgcm_contrib/darwin/pkg/darwin |
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cd MITgcm/pkg |
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ln -sf ../../MITgcm_contrib/darwin/pkg/darwin . |
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cd .. |
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mkdir build run |
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cd build |
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module purge |
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module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt |
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../tools/genmake2 -of \ |
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dcarroll |
1.1 |
../../MITgcm_contrib/ecco_darwin/v4_llc270/code/linux_amd64_ifort+mpi_ice_nas -mo \ |
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'../../MITgcm_contrib/ecco_darwin/v4_llc270/code_darwin ../../MITgcm_contrib/ecco_darwin/v4_llc270/code' |
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dimitri |
1.2 |
make depend |
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make -j 16 |
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dcarroll |
1.1 |
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============== |
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# Instructions for running ECCO-Darwin Version 4 for 1992-2018 period |
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dimitri |
1.2 |
cd ../run |
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ln -sf ../build/mitgcmuv . |
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ln -sf /nobackupp2/dmenemen/public/llc_270/iter42/input/* . |
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ln -sf /nobackupp2/dmenemen/public/llc_270/ecco_darwin_v4/input/* . |
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ln -sf /nobackup/hzhang1/forcing/era_xx . |
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cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* . |
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cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input_darwin/* . |
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qsub job_ECCO_darwin |
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dcarroll |
1.1 |
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============== |
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# Creating input directory for ECCO-Darwin version 4 |
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dimitri |
1.2 |
mkdir /nobackupp2/dmenemen/public/llc_270/ecco_darwin_v4/input |
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cd /nobackupp2/dmenemen/public/llc_270/ecco_darwin_v4/input |
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cp /nobackup/dcarrol2/temp/pickup_ptracers_optimized.0000000001.data pickup_ptracers.0000000001.data |
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cp /nobackup/dcarrol2/temp/pickup_ptracers.0000210384.meta pickup_ptracers.0000000001.meta |
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cp /nobackup/dcarrol2/forcing/apCO2/* . |
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cp /nobackup/dcarrol2/temp/llc270_Mahowald_2009_soluble_iron_dust.bin . |
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