/[MITgcm]/MITgcm_contrib/high_res_cube/README_ice
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revision 1.1 by dimitri, Sun Nov 23 17:16:24 2003 UTC revision 1.12 by dimitri, Mon Dec 15 04:42:19 2003 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: November 21, 2003.  Date last tested: December 11, 2003.
3    
4    
5    ##########################################################################
6    ##########################################################################
7    # 32*32*6*15, 1-cpu cube sphere
8    
9  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
10  cvs login ( CVS password: cvsanon )  cvs login ( CVS password: cvsanon )
11  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
12  cvs co MITgcm_contrib/high_res_cube/matlab-grid-converter  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
13  cvs co MITgcm_contrib/high_res_cube/README_ice  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
14  cvs co -r checkpoint52a_post MITgcm_code  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
15  cvs co MITgcm/verification/global_ocean.cs32x15  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
16    cvs co -r checkpoint52d_pre MITgcm_code
17    cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
18    
19  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
20  cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
21  cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
22  \rm mdsio_readfield.F  \rm mdsio_readfield.F
23  cd ../build  
24    cd ..
25    mkdir build
26    cd build
27  ../../../tools/genmake2 -mods=../code  ../../../tools/genmake2 -mods=../code
28  make depend  make depend
29  make  make
30    
31    cd ..
32    mkdir run
33    cd run
34    \cp ../input/* .
35    \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
36    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
37    ../build/mitgcmuv >& output.txt
38    
39    comparison output is in:
40    ../../../../MITgcm_contrib/high_res_cube/results/output.txt
41    
42    to use matlab to look at the output
43    matlab
44    for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
45        tmp=permute(readbin([fld{1} '.0000001368.data'],[32,6,32]),[1 3 2]);
46        cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
47    end
48    
49    
50    ##########################################################################
51    ##########################################################################
52    # 32*32*6*15, 2-cpu cube sphere on the altices with efc
53    
54    setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
55    cvs login ( CVS password: cvsanon )
56    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
57    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
58    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
59    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
60    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
61    cvs co -r checkpoint52d_pre MITgcm_code
62    cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
63    
64    cd MITgcm/verification/global_ocean.cs32x15/code
65    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
66    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
67    \cp SIZE.h_mpi SIZE.h
68    \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
69    \rm mdsio_readfield.F
70    
71    cd ..
72    mkdir build
73    cd build
74    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
75    make depend
76    make
77    
78    cd ..
79    mkdir run
80    cd run
81    \cp ../input/* .
82    \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
83    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
84    mpirun -np 2 ../build/mitgcmuv
85    
86    
87    ##########################################################################
88    ##########################################################################
89    # 510*510*6*50, 54-cpu cube sphere on the altices with efc
90    
91    setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
92    cvs login ( CVS password: cvsanon )
93    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
94    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
95    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
96    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
97    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
98    cvs co -r checkpoint52d_pre MITgcm_code
99    cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
100    
101    cd MITgcm/verification/global_ocean.cs32x15/code
102    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
103    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
104    \cp SIZE.h_54 SIZE.h
105    \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
106    \cp packages.conf_hr packages.conf
107    \rm mdsio_readfield.F
108    
109    cd ..
110    mkdir build
111    cd build
112    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
113    make depend
114    make
115    
116    cd ..
117    mkdir run
118    cd run
119    \cp ../input/* .
120    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
121    \cp data_hr data
122    \cp data.pkg_hr data.pkg
123    \ln -sf ../../../../run_template/tile00* .
124    \ln -sf ../../../../run_template/LEV* .
125    \ln -sf ../../../../run_template/BATHY_18360x85_filled.bin .
126    qsub job_orion
127    
128    
129    ##########################################################################
130    ##########################################################################
131    # 510*510*6*50, 216-cpu cube sphere on the altices with efc
132    
133    setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
134    cvs login ( CVS password: cvsanon )
135    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
136    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
137    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
138    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
139    cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
140    cvs co -r checkpoint52d_pre MITgcm_code
141    cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
142    
143    cd MITgcm/verification/global_ocean.cs32x15/code
144    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
145    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
146    \cp SIZE.h_216 SIZE.h
147    \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
148    \cp packages.conf_hr packages.conf
149    \rm mdsio_readfield.F
150    
151    cd ..
152    mkdir build
153    cd build
154    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
155    make depend
156    make
157    
158  cd ..  cd ..
159  mkdir run  mkdir run
160  cd run  cd run
161  cp ../input/* .  \cp ../input/* .
162  cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
163  cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp data_hr data
164  ../build/mitgcmuv >& output  \cp data.pkg_hr data.pkg
165    \ln -sf ../../../../run_template/tile00* .
166    \ln -sf ../../../../run_template/LEV* .
167    \ln -sf ../../../../run_template/BATHY_18360x85_filled.bin .
168    qsub job_altix
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