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revision 1.19 by dimitri, Sun Jan 25 01:41:01 2004 UTC revision 1.32 by dimitri, Wed Mar 10 04:49:51 2004 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: January 9, 2004.  Date last tested: March 9, 2004.
3  This is the code used for first multi-year 510x510x6  Code and input used for integrating cube5.
 cube-sphere integration.  
4    
5    
6  ##########################################################################  ##########################################################################
# Line 10  cube-sphere integration. Line 9  cube-sphere integration.
9    
10  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
11  cvs login ( CVS password: cvsanon )  cvs login ( CVS password: cvsanon )
12  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/README_ice  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/README_ice
13  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/code-mods  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/code-mods
14  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/matlab-grid-converter  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/input
15  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/input  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/results
16  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/results  cvs co -r hrcube5 MITgcm_code
17  cvs co -r hrcube_1 MITgcm_code  cvs co -r hrcube5 MITgcm/verification/global_ocean.cs32x15
 cvs co -r hrcube_1 MITgcm/verification/global_ocean.cs32x15  
18    
19    
20  ##########################################################################  ##########################################################################
# Line 27  cd MITgcm/verification/global_ocean.cs32 Line 25  cd MITgcm/verification/global_ocean.cs32
25  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
26  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
27    
28  cd ..  cd ../build
 mkdir build  
 cd build  
29  ../../../tools/genmake2 -mods=../code  ../../../tools/genmake2 -mods=../code
30  make depend  make depend
31    \rm getcon.F
32  make  make
33    
34  cd ..  cd ..
35  mkdir run  mkdir run
36  cd run  cd run
37  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
38  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
39  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
40    
# Line 72  cd MITgcm/verification/global_ocean.cs32 Line 68  cd MITgcm/verification/global_ocean.cs32
68  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
69  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
70  \cp SIZE.h_mpi SIZE.h  \cp SIZE.h_mpi SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
71    
72  cd ..  cd ../build
 mkdir build  
 cd build  
73  \rm *  \rm *
74  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
75  make depend  make depend
76    \rm getcon.F
77  make  make
78    
79  cd ..  cd ..
# Line 87  mkdir run Line 81  mkdir run
81  cd run  cd run
82  \rm *  \rm *
83  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
84  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
85  mpirun -np 2 ../build/mitgcmuv  mpirun -np 2 ../build/mitgcmuv
86    
# Line 102  cd MITgcm/verification/global_ocean.cs32 Line 95  cd MITgcm/verification/global_ocean.cs32
95  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
96  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
97  \cp SIZE.h_54 SIZE.h  \cp SIZE.h_54 SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
98  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
 \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F  
99    
100  cd ..  cd ../build
 mkdir build  
 cd build  
101  \rm *  \rm *
102  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
103  make depend  make depend
104    \rm getcon.F
105  make  make
106    
107  cd ..  cd ..
# Line 120  cd run Line 110  cd run
110  \rm *  \rm *
111  \cp ../input/* .  \cp ../input/* .
112  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
 \cm data.exf_clim_hr data.exf_clim  
113  qsub job_orion  qsub job_orion
114    
115    
116  ##########################################################################  ##########################################################################
117  ##########################################################################  ##########################################################################
118    # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
119    # requires input files in sudirectories run_template and ncep_rgau
120    # presently residing under orion:/tmp1/dmenem/cube
121    
122    cd MITgcm/verification/global_ocean.cs32x15/code
123    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
124    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
125    \cp SIZE.h_41 SIZE.h
126    \cp packages.conf_hr packages.conf
127    
128    cd ../build
129    \rm *
130    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
131    make depend
132    \rm getcon.F
133    make
134    
135    cd ..
136    mkdir run
137    cd run
138    \rm *
139    \cp ../input/* .
140    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
141    qsub job_orion41
142    
143    
144    ##########################################################################
145    ##########################################################################
146  # 510*510*6*50, 216-cpu cube sphere on altix with efc  # 510*510*6*50, 216-cpu cube sphere on altix with efc
147  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
148  # these can be obained from lou:/u/menemenl/cube  # these can be obained from lou:/u/menemenl/cube
# Line 134  cd MITgcm/verification/global_ocean.cs32 Line 151  cd MITgcm/verification/global_ocean.cs32
151  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
152  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
153  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_216 SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
154  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
 \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F  
155    
156  cd ..  cd ../build
 mkdir build  
 cd build  
157  \rm *  \rm *
158  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
159  make depend  make depend
160    \rm getcon.F
161  make  make
162    
163  cd ..  cd ..
# Line 152  cd run Line 166  cd run
166  \rm *  \rm *
167  \cp ../input/* .  \cp ../input/* .
168  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
 \cm data.exf_clim_hr data.exf_clim  
169  qsub job_altix  qsub job_altix
170    
171    
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