/[MITgcm]/MITgcm_contrib/high_res_cube/README_ice
ViewVC logotype

Diff of /MITgcm_contrib/high_res_cube/README_ice

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.19 by dimitri, Sun Jan 25 01:41:01 2004 UTC revision 1.43 by dimitri, Tue Sep 7 08:26:05 2004 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: January 9, 2004.  Date last tested: July 9, 2004.
3  This is the code used for first multi-year 510x510x6  Code and input used for integrating cube9.
 cube-sphere integration.  
4    
5    
6  ##########################################################################  ##########################################################################
7  ##########################################################################  ##########################################################################
8  # getting the code from anonymous CVS server  # getting the code from anonymous CVS server
9    
10  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  cvs co MITgcm_contrib/high_res_cube/README_ice
11  cvs login ( CVS password: cvsanon )  cvs co MITgcm_contrib/high_res_cube/code-mods
12  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/README_ice  cvs co MITgcm_contrib/high_res_cube/input
13  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/results
14  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/matlab-grid-converter  cvs co MITgcm_contrib/edge_problem
15  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/input  cvs co MITgcm_code
16  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/results  cvs co MITgcm/verification/global_ocean.cs32x15
17  cvs co -r hrcube_1 MITgcm_code  cvs co MITgcm/verification/testreport
 cvs co -r hrcube_1 MITgcm/verification/global_ocean.cs32x15  
18    
19    
20  ##########################################################################  ##########################################################################
# Line 25  cvs co -r hrcube_1 MITgcm/verification/g Line 23  cvs co -r hrcube_1 MITgcm/verification/g
23    
24  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
25  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
26  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
27    cd ../build
28  cd ..  \rm *
 mkdir build  
 cd build  
29  ../../../tools/genmake2 -mods=../code  ../../../tools/genmake2 -mods=../code
30  make depend  make depend
31  make  make
32    cd ..
33    mkdir run
34    cd run
35    \rm *
36    \cp ../input/* .
37    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
38    ../build/mitgcmuv >& output.txt
39    
40    comparison output is in:
41    ../../../../MITgcm_contrib/high_res_cube/results/output.txt
42    
43    to use matlab to look at the output
44    matlab
45    
46    for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
47        tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
48        cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
49    end
50    
51    heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);
52    mask=0*heff; mask(find(heff>.001))=1;
53    uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);
54    vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);
55    clf
56    subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')
57    subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')
58    subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')
59    subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')
60    
61    
62    ##########################################################################
63    ##########################################################################
64    # 32*32*6*15, 17-tile, 1-cpu cube sphere experiment
65    
66    cd MITgcm/verification/global_ocean.cs32x15/code
67    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
68    \cp ../code_alt/code.176t_8x4/* .
69    cd ../build
70    \rm *
71    ../../../tools/genmake2 -mods=../code
72    make depend
73    make
74  cd ..  cd ..
75  mkdir run  mkdir run
76  cd run  cd run
77    \rm *
78  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
79  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
80  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
81    
# Line 70  subplot(224), mypcolor(vice(:,:,6)'), co Line 107  subplot(224), mypcolor(vice(:,:,6)'), co
107    
108  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
109  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
110  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
111  \cp SIZE.h_mpi SIZE.h  \cp SIZE.h_mpi SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
112    
113  cd ..  cd ../build
 mkdir build  
 cd build  
114  \rm *  \rm *
115  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
116  make depend  make depend
117  make  make -j
118    
119  cd ..  cd ..
120  mkdir run  mkdir run
121  cd run  cd run
122  \rm *  \rm *
123  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
124  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
125  mpirun -np 2 ../build/mitgcmuv  mpirun -np 2 ../build/mitgcmuv
126    
127    
128  ##########################################################################  ##########################################################################
129  ##########################################################################  ##########################################################################
130  # 510*510*6*50, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
131    # starting with pickup file from end of 1992
132  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
 # presently residing under orion:/tmp1/dmenem/cube  
133    
134  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
135  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
136  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
 \cp SIZE.h_54 SIZE.h  
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
137  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
 \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F  
138    
139  cd ..  cd ../build
 mkdir build  
 cd build  
140  \rm *  \rm *
141  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
142  make depend  make depend
143  make  make -j
144    
145  cd ..  cd ..
146  mkdir run  mkdir run
# Line 120  cd run Line 148  cd run
148  \rm *  \rm *
149  \cp ../input/* .  \cp ../input/* .
150  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
151  \cm data.exf_clim_hr data.exf_clim  qsub job_altix92_54t
 qsub job_orion  
152    
153    
154  ##########################################################################  ##########################################################################
# Line 134  cd MITgcm/verification/global_ocean.cs32 Line 161  cd MITgcm/verification/global_ocean.cs32
161  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
162  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
163  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_216 SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
164  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
165  \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F  
166    cd ../build
167    \rm *
168    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
169    make depend
170    make -j 16
171    
172  cd ..  cd ..
173  mkdir build  mkdir run
174  cd build  cd run
175    \rm *
176    \cp ../input/* .
177    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
178    qsub job_altix92
179    
180    
181    
182    
183    
184    
185    
186    
187    
188    
189    
190    
191    
192    
193    
194    
195    
196    
197    ##########################################################################
198    ##########################################################################
199    # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
200    # requires input files in sudirectories run_template and ncep_rgau
201    # presently residing under orion:/tmp1/dmenem/cube
202    
203    cd MITgcm/verification/global_ocean.cs32x15/code
204    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
205    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
206    \cp SIZE.h_54 SIZE.h
207    \cp packages.conf_hr packages.conf
208    
209    cd ../build
210  \rm *  \rm *
211  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
212  make depend  make depend
213  make  make -j
214    
215  cd ..  cd ..
216  mkdir run  mkdir run
# Line 152  cd run Line 218  cd run
218  \rm *  \rm *
219  \cp ../input/* .  \cp ../input/* .
220  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
221  \cm data.exf_clim_hr data.exf_clim  qsub job_orion
222  qsub job_altix  
223    
224    ##########################################################################
225    ##########################################################################
226    # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
227    # requires input files in sudirectories run_template and ncep_rgau
228    # presently residing under orion:/tmp1/dmenem/cube
229    
230    cd MITgcm/verification/global_ocean.cs32x15/code
231    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
232    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
233    \cp SIZE.h_41 SIZE.h
234    \cp packages.conf_hr packages.conf
235    
236    cd ../build
237    \rm *
238    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
239    make depend
240    make -j
241    
242    cd ..
243    mkdir run
244    cd run
245    \rm *
246    \cp ../input/* .
247    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
248    qsub job_orion41
249    
250    
251    ##########################################################################
252    ##########################################################################
253    # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
254    # requires input files in sudirectories run_template and ncep_rgau
255    # presently residing under orion:/tmp1/dmenem/cube
256    
257    cd MITgcm/verification/global_ocean.cs32x15/code
258    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
259    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
260    \cp SIZE.h_50 SIZE.h
261    \cp packages.conf_hr packages.conf
262    
263    cd ../build
264    \rm *
265    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
266    make depend
267    make -j
268    
269    cd ..
270    mkdir run
271    cd run
272    \rm *
273    \cp ../input/* .
274    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
275    qsub job_orion
276    
277    
278  ##########################################################################  ##########################################################################
# Line 161  qsub job_altix Line 280  qsub job_altix
280  # matlab script for generating pChkptFreq  # matlab script for generating pChkptFreq
281    
282  nTimeSteps=26352;  nTimeSteps=26352;
283  for niter0=216:26352:(26352*11)  for niter0=216:26352:(26352*12)
284   pChkptFreq=(niter0+nTimeSteps)*1200;   pChkptFreq=(niter0+nTimeSteps)*1200;
285   day=pChkptFreq/24/60/60;   day=pChkptFreq/24/60/60;
286   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...
# Line 179  niter0 = 184680, day = 2931, 10-Jan-2000 Line 298  niter0 = 184680, day = 2931, 10-Jan-2000
298  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800
299  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200
300  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600
301    niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000
Legend:
Removed from v.1.19  
changed lines
  Added in v.1.43
  ViewVC Help
Powered by ViewVC 1.1.22