/[MITgcm]/MITgcm_contrib/high_res_cube/README_ice
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revision 1.29 by dimitri, Tue Feb 17 22:35:44 2004 UTC revision 1.35 by dimitri, Sun Mar 28 08:49:44 2004 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: February 13, 2004.  Date last tested: March 9, 2004.
3  This is the code used for cube4, the third 1992-2002 510x510x6  Code and input used for integrating cube5.
 cube-sphere integration.  
4    
5    
6  ##########################################################################  ##########################################################################
# Line 10  cube-sphere integration. Line 9  cube-sphere integration.
9    
10  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
11  cvs login ( CVS password: cvsanon )  cvs login ( CVS password: cvsanon )
12  cvs co -r hrcube4 MITgcm_contrib/high_res_cube/README_ice  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/README_ice
13  cvs co -r hrcube4 MITgcm_contrib/high_res_cube/code-mods  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/code-mods
14  cvs co -r hrcube4 MITgcm_contrib/high_res_cube/matlab-grid-converter  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/input
15  cvs co -r hrcube4 MITgcm_contrib/high_res_cube/input  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/results
16  cvs co -r hrcube4 MITgcm_contrib/high_res_cube/results  cvs co -r hrcube5 MITgcm_code
17  cvs co -r hrcube4 MITgcm_code  cvs co -r hrcube5 MITgcm/verification/global_ocean.cs32x15
 cvs co -r hrcube4 MITgcm/verification/global_ocean.cs32x15  
18    
19    
20  ##########################################################################  ##########################################################################
# Line 25  cvs co -r hrcube4 MITgcm/verification/gl Line 23  cvs co -r hrcube4 MITgcm/verification/gl
23    
24  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
25  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
26  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
27    
28  cd ../build  cd ../build
29  ../../../tools/genmake2 -mods=../code  ../../../tools/genmake2 -mods=../code
# Line 36  cd .. Line 34  cd ..
34  mkdir run  mkdir run
35  cd run  cd run
36  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
37  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
38  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
39    
# Line 68  subplot(224), mypcolor(vice(:,:,6)'), co Line 65  subplot(224), mypcolor(vice(:,:,6)'), co
65    
66  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
67  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
68  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
69  \cp SIZE.h_mpi SIZE.h  \cp SIZE.h_mpi SIZE.h
70    
71  cd ../build  cd ../build
# Line 82  mkdir run Line 79  mkdir run
79  cd run  cd run
80  \rm *  \rm *
81  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
82  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
83  mpirun -np 2 ../build/mitgcmuv  mpirun -np 2 ../build/mitgcmuv
84    
85    
86  ##########################################################################  ##########################################################################
87  ##########################################################################  ##########################################################################
88  # 510*510*6*50, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
89  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
90  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
91    
# Line 116  qsub job_orion Line 112  qsub job_orion
112    
113  ##########################################################################  ##########################################################################
114  ##########################################################################  ##########################################################################
115    # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
116    # requires input files in sudirectories run_template and ncep_rgau
117    # presently residing under orion:/tmp1/dmenem/cube
118    
119    cd MITgcm/verification/global_ocean.cs32x15/code
120    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
121    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
122    \cp packages.conf_hr packages.conf
123    
124    cd ../build
125    \rm *
126    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
127    make depend
128    make
129    
130    cd ..
131    mkdir run
132    cd run
133    \rm *
134    \cp ../input/* .
135    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
136    qsub job_orion
137    
138    
139    ##########################################################################
140    ##########################################################################
141  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
142  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
143  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
# Line 143  qsub job_orion41 Line 165  qsub job_orion41
165    
166  ##########################################################################  ##########################################################################
167  ##########################################################################  ##########################################################################
168    # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
169    # requires input files in sudirectories run_template and ncep_rgau
170    # presently residing under orion:/tmp1/dmenem/cube
171    
172    cd MITgcm/verification/global_ocean.cs32x15/code
173    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
174    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
175    \cp SIZE.h_50 SIZE.h
176    \cp packages.conf_hr packages.conf
177    
178    cd ../build
179    \rm *
180    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
181    make depend
182    make
183    
184    cd ..
185    mkdir run
186    cd run
187    \rm *
188    \cp ../input/* .
189    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
190    qsub job_orion
191    
192    
193    ##########################################################################
194    ##########################################################################
195  # 510*510*6*50, 216-cpu cube sphere on altix with efc  # 510*510*6*50, 216-cpu cube sphere on altix with efc
196  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
197  # these can be obained from lou:/u/menemenl/cube  # these can be obained from lou:/u/menemenl/cube
# Line 173  qsub job_altix Line 222  qsub job_altix
222  # matlab script for generating pChkptFreq  # matlab script for generating pChkptFreq
223    
224  nTimeSteps=26352;  nTimeSteps=26352;
225  for niter0=216:26352:(26352*11)  for niter0=216:26352:(26352*12)
226   pChkptFreq=(niter0+nTimeSteps)*1200;   pChkptFreq=(niter0+nTimeSteps)*1200;
227   day=pChkptFreq/24/60/60;   day=pChkptFreq/24/60/60;
228   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...
# Line 191  niter0 = 184680, day = 2931, 10-Jan-2000 Line 240  niter0 = 184680, day = 2931, 10-Jan-2000
240  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800
241  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200
242  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600
243    niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000
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