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revision 1.39 by dimitri, Sun Jun 27 21:18:15 2004 UTC revision 1.42 by dimitri, Fri Jul 9 23:58:24 2004 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: March 28, 2004.  Date last tested: July 9, 2004.
3  Code and input used for integrating cube5.  Code and input used for integrating cube9.
4    
5    
6  ##########################################################################  ##########################################################################
# Line 12  cvs co MITgcm_contrib/high_res_cube/code Line 12  cvs co MITgcm_contrib/high_res_cube/code
12  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
13  cvs co MITgcm_contrib/high_res_cube/results  cvs co MITgcm_contrib/high_res_cube/results
14  cvs co MITgcm_contrib/edge_problem  cvs co MITgcm_contrib/edge_problem
15  cvs co MITgcm_code  cvs co -r checkpoint54b_post MITgcm_code
16  cvs co MITgcm/verification/global_ocean.cs32x15  cvs co -r checkpoint54b_post MITgcm/verification/global_ocean.cs32x15
17  cvs co MITgcm/verification/testreport  cvs co -r checkpoint54b_post MITgcm/verification/testreport
18    
19    
20  ##########################################################################  ##########################################################################
# Line 112  cd MITgcm/verification/global_ocean.cs32 Line 112  cd MITgcm/verification/global_ocean.cs32
112    
113  cd ../build  cd ../build
114  \rm *  \rm *
115  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
116  make depend  make depend
117  make  make -j
118    
119  cd ..  cd ..
120  mkdir run  mkdir run
# Line 127  mpirun -np 2 ../build/mitgcmuv Line 127  mpirun -np 2 ../build/mitgcmuv
127    
128  ##########################################################################  ##########################################################################
129  ##########################################################################  ##########################################################################
130  # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
131    # starting with pickup file from end of 1992
132  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
 # presently residing under orion:/tmp1/dmenem/cube  
133    
134  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
135  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
136  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
 \cp SIZE.h_54 SIZE.h  
137  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
138    
139  cd ../build  cd ../build
140  \rm *  \rm *
141  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
142  make depend  make depend
143  make  make -j
144    
145  cd ..  cd ..
146  mkdir run  mkdir run
# Line 149  cd run Line 148  cd run
148  \rm *  \rm *
149  \cp ../input/* .  \cp ../input/* .
150  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
151  qsub job_orion  qsub job_altix92_54t
152    
153    
154  ##########################################################################  ##########################################################################
155  ##########################################################################  ##########################################################################
156  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 216-cpu cube sphere on altix with efc
 # starting with pickup file from end of 1992  
157  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
158  # presently residing under orion:/tmp1/dmenem/cube  # these can be obained from lou:/u/menemenl/cube
159    
160  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
161  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
162  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
163    \cp SIZE.h_216 SIZE.h
164  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
165    
166  cd ../build  cd ../build
167  \rm *  \rm *
168  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
169  make depend  make depend
170  make  make -j
171    
172  cd ..  cd ..
173  mkdir run  mkdir run
# Line 176  cd run Line 175  cd run
175  \rm *  \rm *
176  \cp ../input/* .  \cp ../input/* .
177  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
178  qsub job_altix93_newIO  qsub job_altix92
179    
180    
181    
182    
183    
184    
185    
186    
187    
188    
189    
190    
191    
192    
193    
194    
195    
196    
197  ##########################################################################  ##########################################################################
198  ##########################################################################  ##########################################################################
199  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc  # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
200  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
201  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
202    
203  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
204  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
205  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
206  \cp SIZE.h_41 SIZE.h  \cp SIZE.h_54 SIZE.h
207  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
208    
209  cd ../build  cd ../build
210  \rm *  \rm *
211  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
212  make depend  make depend
213  make  make -j
214    
215  cd ..  cd ..
216  mkdir run  mkdir run
# Line 203  cd run Line 218  cd run
218  \rm *  \rm *
219  \cp ../input/* .  \cp ../input/* .
220  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
221  qsub job_orion41  qsub job_orion
222    
223    
224  ##########################################################################  ##########################################################################
225  ##########################################################################  ##########################################################################
226  # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
227  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
228  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
229    
230  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
231  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
232  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
233  \cp SIZE.h_50 SIZE.h  \cp SIZE.h_41 SIZE.h
234  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
235    
236  cd ../build  cd ../build
237  \rm *  \rm *
238  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
239  make depend  make depend
240  make  make -j
241    
242  cd ..  cd ..
243  mkdir run  mkdir run
# Line 230  cd run Line 245  cd run
245  \rm *  \rm *
246  \cp ../input/* .  \cp ../input/* .
247  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
248  qsub job_orion  qsub job_orion41
249    
250    
251  ##########################################################################  ##########################################################################
252  ##########################################################################  ##########################################################################
253  # 510*510*6*50, 216-cpu cube sphere on altix with efc  # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
254  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
255  # these can be obained from lou:/u/menemenl/cube  # presently residing under orion:/tmp1/dmenem/cube
256    
257  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
258  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
259  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
260  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_50 SIZE.h
261  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
262    
263  cd ../build  cd ../build
264  \rm *  \rm *
265  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
266  make depend  make depend
267  make  make -j
268    
269  cd ..  cd ..
270  mkdir run  mkdir run
# Line 257  cd run Line 272  cd run
272  \rm *  \rm *
273  \cp ../input/* .  \cp ../input/* .
274  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
275  qsub job_altix  qsub job_orion
276    
277    
278  ##########################################################################  ##########################################################################
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