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revision 1.39 by dimitri, Sun Jun 27 21:18:15 2004 UTC revision 1.65 by dimitri, Tue Sep 5 02:49:56 2006 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: March 28, 2004.  
3  Code and input used for integrating cube5.  Last updated: September 4, 2006
4    Modified 32*32*6*15 experiments to use grid_cs32.* files from
5     verification/tutorial_held_suarez_cs/input instead of
6     tile* files from verification/global_ocean.cs32x15/input
7    
8    Updated: August 8, 2006
9    216-CPU code and input used for integrating cube37
10    using "June 10, 2006" MITgcm code.
11    
12    
13  ##########################################################################  ##########################################################################
# Line 11  cvs co MITgcm_contrib/high_res_cube/READ Line 18  cvs co MITgcm_contrib/high_res_cube/READ
18  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/code-mods
19  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
20  cvs co MITgcm_contrib/high_res_cube/results  cvs co MITgcm_contrib/high_res_cube/results
 cvs co MITgcm_contrib/edge_problem  
21  cvs co MITgcm_code  cvs co MITgcm_code
22  cvs co MITgcm/verification/global_ocean.cs32x15  cvs co MITgcm/verification/global_ocean.cs32x15
23  cvs co MITgcm/verification/testreport  cvs co MITgcm/verification/tutorial_held_suarez_cs/input
24    
25    
26  ##########################################################################  ##########################################################################
# Line 33  cd .. Line 39  cd ..
39  mkdir run  mkdir run
40  cd run  cd run
41  \rm *  \rm *
42    \cp ../../tutorial_held_suarez_cs/input/grid* .
43  \cp ../input/* .  \cp ../input/* .
44  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
45  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
# Line 43  comparison output is in: Line 50  comparison output is in:
50  to use matlab to look at the output  to use matlab to look at the output
51  matlab  matlab
52    
53  for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}  for fld={'VICEtave','UICEtave','HEFFtave','AREAtave','QSWtave', ...
54             'QNETtave','FVtave','FUtave','EmPmRtave'}
55      tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);      tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
56      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
57  end  end
58    
59  heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);  heff=permute(readbin(['HEFFtave.0000000020.data'],[32,6,32]),[1 3 2]);
60  mask=0*heff; mask(find(heff>.001))=1;  mask=0*heff; mask(find(heff>.001))=1;
61  uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);  uice=mask.*permute(readbin(['UICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
62  vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);  vice=mask.*permute(readbin(['VICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
63  clf  clf
64  subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')  subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3')
65  subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')  subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6')
66  subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')  subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3')
67  subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')  subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6')
68    
69    
70  ##########################################################################  ##########################################################################
# Line 75  cd .. Line 83  cd ..
83  mkdir run  mkdir run
84  cd run  cd run
85  \rm *  \rm *
86    \cp ../../tutorial_held_suarez_cs/input/grid* .
87  \cp ../input/* .  \cp ../input/* .
88  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
89  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
90    
 comparison output is in:  
 ../../../../MITgcm_contrib/high_res_cube/results/output.txt  
91    
92  to use matlab to look at the output  ##########################################################################
93  matlab  ##########################################################################
94    # 32*32*6*15, 2-cpu cube sphere on the altices with ifort
95    
96  for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}  cd MITgcm/verification/global_ocean.cs32x15/code
97      tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
98      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
99  end  \cp SIZE.h_mpi SIZE.h
100    
101  heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);  cd ../build
102  mask=0*heff; mask(find(heff>.001))=1;  \rm *
103  uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
104  vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);  make depend
105  clf  make -j
106  subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')  
107  subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')  cd ..
108  subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')  mkdir run
109  subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')  cd run
110    \rm *
111    \cp ../../tutorial_held_suarez_cs/input/grid* .
112    \cp ../input/* .
113    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
114    mpirun -np 2 ../build/mitgcmuv
115    
116    
117  ##########################################################################  ##########################################################################
118  ##########################################################################  ##########################################################################
119  # 32*32*6*15, 2-cpu cube sphere on the altices with efc  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
120    # starting with pickup file from end of 1992
121    # requires input files in sudirectories run_template and ncep_rgau
122    
123  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
124  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
125  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
126  \cp SIZE.h_mpi SIZE.h  \cp packages.conf_hr packages.conf
127    
128  cd ../build  cd ../build
129  \rm *  \rm *
130  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
131  make depend  make depend
132  make  make -j
133    
134  cd ..  cd ..
135  mkdir run  mkdir run
# Line 122  cd run Line 137  cd run
137  \rm *  \rm *
138  \cp ../input/* .  \cp ../input/* .
139  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
140  mpirun -np 2 ../build/mitgcmuv  qsub job_altix92_54t
141    
142    
143  ##########################################################################  ##########################################################################
144  ##########################################################################  ##########################################################################
145  # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 216-cpu cube sphere on altix with ifort and pkg/diagnostics
146  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
147  # presently residing under orion:/tmp1/dmenem/cube  # these can be obained from lou:/u/menemenl/cube
148    
149  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
150  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
151  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
152  \cp SIZE.h_54 SIZE.h  \cp SIZE.h_216 SIZE.h
153  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
154    
155  cd ../build  cd ../build
156  \rm *  \rm *
157  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
158  make depend  make depend
159  make  make -j
160    
161  cd ..  cd ..
162  mkdir run  mkdir run
# Line 149  cd run Line 164  cd run
164  \rm *  \rm *
165  \cp ../input/* .  \cp ../input/* .
166  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
167  qsub job_orion  ln -sf ../../../../run_template/* .
168    \rm pickup* data.pkg data.seaice data.exf_clim data.exf data
169    \rm *192_94* *cs32* *.m lev* tren* job_c* job_altix150 job_altix92_54t
170    ln -sf ../../../../run_template/pickup.0000000216.cube27 pickup.0000000216
171    ln -sf  ../../../../run_template/pickup_seaice.0000000216.cube27 pickup_seaice.0000000216
172    \cp ../build/mitgcmuv .
173    qsub job_altix
174    
175    
176  ##########################################################################  ##########################################################################
177  ##########################################################################  ##########################################################################
178  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 150-cpu, excludes land
179  # starting with pickup file from end of 1992  # uses s1500t_17x51 configuration
 # requires input files in sudirectories run_template and ncep_rgau  
 # presently residing under orion:/tmp1/dmenem/cube  
180    
181  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
182  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
183  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
184    \cp SIZE.h_150 SIZE.h
185  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
186    
187  cd ../build  cd ../build
188  \rm *  \rm *
189  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
190  make depend  make depend
191  make  make -j
192    
193  cd ..  cd ..
194  mkdir run  mkdir run
# Line 176  cd run Line 196  cd run
196  \rm *  \rm *
197  \cp ../input/* .  \cp ../input/* .
198  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
199  qsub job_altix93_newIO  ln -sf ../../../../run_template/* .
200    \rm pickup*
201    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
202    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
203    \cp ../build/mitgcmuv mitgcmuv150
204    qsub job_altix150
205    
206    
207    
208    
209  ##########################################################################  ##########################################################################
210  ##########################################################################  ##########################################################################
211  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 375-cpu, excludes land
212  # requires input files in sudirectories run_template and ncep_rgau  # uses s1500t_17x51 configuration
213  # presently residing under orion:/tmp1/dmenem/cube  # example for running on c17-c20 using arrayd
214    
215  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
216  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
217  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
218  \cp SIZE.h_41 SIZE.h  \cp SIZE.h_375 SIZE.h
219  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
220    
221  cd ../build  cd ../build
222  \rm *  \rm *
223  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
224  make depend  make depend
225  make  make -j
226    
227  cd ..  cd ..
228  mkdir run  mkdir run
# Line 203  cd run Line 230  cd run
230  \rm *  \rm *
231  \cp ../input/* .  \cp ../input/* .
232  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
233  qsub job_orion41  ln -sf ../../../../run_template/* .
234    \rm pickup*
235    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
236    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
237    \cp ../build/mitgcmuv .
238    job_c20_375cpu < /dev/null >&! output.run &
239    
240    
241    
242    
243    
244    
245    
246    
247    
248    
249    
250    
251  ##########################################################################  ##########################################################################
252  ##########################################################################  ##########################################################################
253  # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 375-cpu, excludes land
254    # uses s1500t_17x51 configuration
255    # example for running on c17-c20 using arrayd
256    
257    cd MITgcm/verification/global_ocean.cs32x15/code
258    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
259    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
260    \cp SIZE.h_375 SIZE.h
261    \cp packages.conf_hr packages.conf
262    
263    cd ../build
264    \rm *
265    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
266    make depend
267    make -j
268    
269    cd ..
270    mkdir run
271    cd run
272    \rm *
273    \cp ../input/* .
274    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
275    ln -sf ../../../../run_template/* .
276    \rm pickup*
277    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
278    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
279    \cp ../build/mitgcmuv .
280    job_c20_375cpu < /dev/null >&! output.run &
281    
282    
283    ##########################################################################
284    ##########################################################################
285    # 510*510*6*50, 1500-tile, 500-cpu, excludes land
286    # uses s1500t_17x51 configuration
287    # example for running on c17-c20 using arrayd
288    
289    cd MITgcm/verification/global_ocean.cs32x15/code
290    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
291    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
292    \cp SIZE.h_500 SIZE.h
293    \cp packages.conf_hr packages.conf
294    
295    cd ../build
296    \rm *
297    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
298    make depend
299    make -j
300    
301    cd ..
302    mkdir run
303    cd run
304    \rm *
305    \cp ../input/* .
306    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
307    ln -sf ../../../../run_template/* .
308    \rm pickup*
309    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
310    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
311    \cp ../build/mitgcmuv .
312    job_c19_500cpu < /dev/null >&! output.run &
313    
314    
315    
316    
317    
318    ##########################################################################
319    ##########################################################################
320    # 510*510*6*50, 216-cpu cube sphere on cosmos
321    
322    cd MITgcm/verification/global_ocean.cs32x15/code
323    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
324    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
325    \cp SIZE.h_216 SIZE.h
326    \cp packages.conf_hr packages.conf
327    
328    module unload latest_intel80
329    module unload mpich-gm-intel80
330    module load latest_intel81
331    module load mpich-gm-intel81
332    
333    cd ../build
334    \rm *
335    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia32_ifort+mpi_cosmos
336    make depend
337    make -j
338    
339    cd ..
340    mkdir run
341    cd run
342    \rm *
343    \cp ../input/* .
344    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
345    ln -sf ../../../../run_template/* .
346    \rm pickup*
347    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
348    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
349    \cp ../build/mitgcmuv .
350    bsub < job_cosmos
351    
352    
353    
354    
355    
356    
357    
358    
359    
360    
361    
362    
363    
364    
365    
366    
367    
368    
369    
370    
371    ##########################################################################
372    ##########################################################################
373    # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
374  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
375  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
376    
377  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
378  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
379  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
380  \cp SIZE.h_50 SIZE.h  \cp SIZE.h_54 SIZE.h
381  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
382    
383  cd ../build  cd ../build
384  \rm *  \rm *
385  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
386  make depend  make depend
387  make  make -j
388    
389  cd ..  cd ..
390  mkdir run  mkdir run
# Line 235  qsub job_orion Line 397  qsub job_orion
397    
398  ##########################################################################  ##########################################################################
399  ##########################################################################  ##########################################################################
400  # 510*510*6*50, 216-cpu cube sphere on altix with efc  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
401  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
402  # these can be obained from lou:/u/menemenl/cube  # presently residing under orion:/tmp1/dmenem/cube
403    
404  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
405  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
406  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
407  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_41 SIZE.h
408  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
409    
410  cd ../build  cd ../build
411  \rm *  \rm *
412  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
413  make depend  make depend
414  make  make -j
415    
416  cd ..  cd ..
417  mkdir run  mkdir run
# Line 257  cd run Line 419  cd run
419  \rm *  \rm *
420  \cp ../input/* .  \cp ../input/* .
421  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
422  qsub job_altix  qsub job_orion41
423    
424    
425  ##########################################################################  ##########################################################################
426  ##########################################################################  ##########################################################################
427  # matlab script for generating pChkptFreq  # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
428    # requires input files in sudirectories run_template and ncep_rgau
429    # presently residing under orion:/tmp1/dmenem/cube
430    
431  nTimeSteps=26352;  cd MITgcm/verification/global_ocean.cs32x15/code
432  for niter0=216:26352:(26352*12)  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
433   pChkptFreq=(niter0+nTimeSteps)*1200;  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
434   day=pChkptFreq/24/60/60;  \cp SIZE.h_50 SIZE.h
435   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...  \cp packages.conf_hr packages.conf
  datestr(datenum(1992,1,1)+day) ', pChkptFreq=' int2str(pChkptFreq)])  
 end  
436    
437  niter0 = 216   , day = 369 , 04-Jan-1993, pChkptFreq = 31881600  cd ../build
438  niter0 = 26568 , day = 735 , 05-Jan-1994, pChkptFreq = 63504000  \rm *
439  niter0 = 52920 , day = 1101, 06-Jan-1995, pChkptFreq = 95126400  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
440  niter0 = 79272 , day = 1467, 07-Jan-1996, pChkptFreq = 126748800  make depend
441  niter0 = 105624, day = 1833, 07-Jan-1997, pChkptFreq = 158371200  make -j
442  niter0 = 131976, day = 2199, 08-Jan-1998, pChkptFreq = 189993600  
443  niter0 = 158328, day = 2565, 09-Jan-1999, pChkptFreq = 221616000  cd ..
444  niter0 = 184680, day = 2931, 10-Jan-2000, pChkptFreq = 253238400  mkdir run
445  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800  cd run
446  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200  \rm *
447  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600  \cp ../input/* .
448  niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
449    qsub job_orion
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