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revision 1.10 by dimitri, Sun Dec 14 02:59:06 2003 UTC revision 1.86 by dimitri, Fri Jan 5 20:56:00 2007 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
 Date last tested: December 11, 2003.  
2    
3    Forcing fields and other input files needed for the CS510
4    configuration can be obtained from
5    http://ecco2.org/products/model_setups/cs510.html
6    
7    =================
8    UPDATES
9    
10    January 5, 2006: cube50, same as cube48 but with snow advection
11    
12    December 30, 2006: updates for cube49, the first
13    "blend" integration.
14    
15    December 11, 2006: preparing for cube47, same as cube43
16    but with Arctic monthly river runoff climatology.
17    
18    December 5, 2006: 216-CPU code for cube46
19    Changed diagnostics to accomodate JMCs latest and some
20    changes to code-mods/CPP_EEOPTIONS.h and W2_OPTIONS.h
21    to speed up code.
22    
23    November 7, 2006: 216-CPU code for cube43
24    Bug fixes in growth.F routine and new set of diagnostics
25    
26    October 15, 2006: 216-CPU code for cube40
27    
28    September 28, 2006: 216-CPU code for cube38
29    
30    September 4, 2006
31    Modified 32*32*6*15 experiments to use grid_cs32.* files from
32     verification/tutorial_held_suarez_cs/input instead of
33     tile* files from verification/global_ocean.cs32x15/input
34    
35    August 8, 2006: 216-CPU code and input used for cube37
36    using "June 10, 2006" MITgcm code.
37    
38    for online T/S profile diagnostics all that is needed is
39      profiles_init_fixed
40      profiles_inloop
41    see pkg/ecco/ecco_cost_init_fixed.F
42        pkg/ecco/cost_averagesfields.F
43    
44  ##########################################################################  ##########################################################################
45  ##########################################################################  ##########################################################################
46  # 32*32*6*15, 1-cpu cube sphere  # Get forcing files, etc.
47    # Example below is for cube46 on /nobackup2a/menemenl
48    
49    cd /nobackup2a/menemenl
50    mkdir cube47
51    cd cube47
52    ln -sf ../run_template .
53    ln -sf ../ncep_rgau .
54    
55    
56    ##########################################################################
57    ##########################################################################
58    # getting the code from anonymous CVS server
59    
60      bash or sh shell:
61        $ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack'
62        $ cvs login
63          ( enter the CVS password: "cvsanon" )
64    
65      tcsh or csh shell:
66        $ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack'
67        $ cvs login
68          ( enter the CVS password: "cvsanon" )
69    
70    cvs co MITgcm_contrib/high_res_cube/README_ice
71    cvs co MITgcm_contrib/high_res_cube/code-mods
72    cvs co MITgcm_contrib/high_res_cube/input
73    cvs co MITgcm_contrib/high_res_cube/results
74    cvs co MITgcm_code
75    cvs co MITgcm/verification/global_ocean.cs32x15
76    cvs co MITgcm/verification/tutorial_held_suarez_cs/input
77    
78  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  
79  cvs login ( CVS password: cvsanon )  ##########################################################################
80  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice  ##########################################################################
81  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods  # 510*510*6*50, 216-cpu cube sphere on altix with ifort and pkg/diagnostics
 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter  
 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input  
 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results  
 cvs co -r checkpoint52d_pre MITgcm_code  
 cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15  
82    
83  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
84  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
85  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
86  \rm mdsio_readfield.F  \cp SIZE.h_216 SIZE.h
87    \cp packages.conf_hr packages.conf
88    
89    cd ../build
90    \rm *
91    ../../../tools/genmake2 -mods=../code -of ../code/linux_ia64_ifort+mpi_altix_nas
92    make depend
93    make -j
94    
95  cd ..  cd ..
96  mkdir build  mkdir run
97  cd build  cd run
98    \rm *
99    \cp ../input/* .
100    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
101    ln -sf ../../../../run_template/* .
102    \rm pickup* eedata.mth data.pkg data.seaice data.exf_clim data.exf data.mnc data pr*
103    \rm bathy_Hmin50.bin *192_94* *cs32* *.m lev* tren* job_c* job_altix150 job_altix92_54t
104    ln -sf ../../../../run_template/pickup.0000000216.cube49 pickup.0000000216
105    ln -sf  ../../../../run_template/pickup_seaice.0000000216.cube48 pickup_seaice.0000000216
106    \cp ../build/mitgcmuv .
107    qsub job_altix
108    
109    
110    ##########################################################################
111    ##########################################################################
112    # 32*32*6*15, 1-cpu cube sphere
113    
114    cd MITgcm/verification/global_ocean.cs32x15/code
115    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
116    \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
117    cd ../build
118    \rm *
119  ../../../tools/genmake2 -mods=../code  ../../../tools/genmake2 -mods=../code
120  make depend  make depend
121  make  make
   
122  cd ..  cd ..
123  mkdir run  mkdir run
124  cd run  cd run
125    \rm *
126    \cp ../../tutorial_held_suarez_cs/input/grid* .
127  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
128  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
129  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
130    
# Line 41  comparison output is in: Line 133  comparison output is in:
133    
134  to use matlab to look at the output  to use matlab to look at the output
135  matlab  matlab
136  for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}  
137      tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);  for fld={'SIuice','SIvice','SIheff','SIarea','oceQsw', ...
138             'surForcT','oceTAUX','oceTAUY','surForcS'}
139        tmp=permute(readbin([fld{1} '.0000000072.data'],[32,6,32]),[1 3 2]);
140      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
141  end  end
142    
143    heff=permute(readbin(['SIheff.0000000072.data'],[32,6,32]),[1 3 2]);
144    mask=0*heff; mask(find(heff>.001))=1;
145    uice=mask.*permute(readbin(['SIuice.0000000072.data'],[32,6,32]),[1 3 2]);
146    vice=mask.*permute(readbin(['SIvice.0000000072.data'],[32,6,32]),[1 3 2]);
147    clf
148    subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3')
149    subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6')
150    subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3')
151    subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6')
152    
153    
154  ##########################################################################  ##########################################################################
155  ##########################################################################  ##########################################################################
156  # 32*32*6*15, 2-cpu cube sphere on the altices with efc  # 32*32*6*15, 17-tile, 1-cpu cube sphere experiment
157    
158  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  cd MITgcm/verification/global_ocean.cs32x15/code
159  cvs login ( CVS password: cvsanon )  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
160  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice  \cp ../code_alt/code.176t_8x4/* .
161  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods  cd ../build
162  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter  \rm *
163  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input  ../../../tools/genmake2 -mods=../code
164  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results  make depend
165  cvs co -r checkpoint52d_pre MITgcm_code  make
166  cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15  cd ..
167    mkdir run
168    cd run
169    \rm *
170    \cp ../../tutorial_held_suarez_cs/input/grid* .
171    \cp ../input/* .
172    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
173    ../build/mitgcmuv >& output.txt
174    
175    
176    ##########################################################################
177    ##########################################################################
178    # 32*32*6*15, 2-cpu cube sphere on the altices with ifort
179    
180  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
181  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
182  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
183  \cp SIZE.h_mpi SIZE.h  \cp SIZE.h_mpi SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
 \rm mdsio_readfield.F  
184    
185  cd ..  cd ../build
186  mkdir build  \rm *
187  cd build  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  
188  make depend  make depend
189  make  make -j
190    
191  cd ..  cd ..
192  mkdir run  mkdir run
193  cd run  cd run
194    \rm *
195    \cp ../../tutorial_held_suarez_cs/input/grid* .
196  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
197  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
198  mpirun -np 2 ../build/mitgcmuv  mpirun -np 2 ../build/mitgcmuv
199    
200    
201  ##########################################################################  ##########################################################################
202  ##########################################################################  ##########################################################################
203  # 510*510*6*50, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
204    # starting with pickup file from end of 1992
205    # requires input files in sudirectories run_template and ncep_rgau
206    
207    cd MITgcm/verification/global_ocean.cs32x15/code
208    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
209    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
210    \cp packages.conf_hr packages.conf
211    
212  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  cd ../build
213  cvs login ( CVS password: cvsanon )  \rm *
214  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
215  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods  make depend
216  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter  make -j
217  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input  
218  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results  cd ..
219  cvs co -r checkpoint52d_pre MITgcm_code  mkdir run
220  cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15  cd run
221    \rm *
222    \cp ../input/* .
223    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
224    qsub job_altix92_54t
225    
226    
227    ##########################################################################
228    ##########################################################################
229    # 510*510*6*50, 1500-tile, 150-cpu, excludes land
230    # uses s1500t_17x51 configuration
231    
232  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
233  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
234  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
235  \cp SIZE.h_54 SIZE.h  \cp SIZE.h_150 SIZE.h
236  \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  \cp packages.conf_hr packages.conf
237  \rm mdsio_readfield.F  
238    cd ../build
239    \rm *
240    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
241    make depend
242    make -j
243    
244    cd ..
245    mkdir run
246    cd run
247    \rm *
248    \cp ../input/* .
249    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
250    ln -sf ../../../../run_template/* .
251    \rm pickup*
252    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
253    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
254    \cp ../build/mitgcmuv mitgcmuv150
255    qsub job_altix150
256    
257    
258    ##########################################################################
259    ##########################################################################
260    # 510*510*6*50, 1500-tile, 375-cpu, excludes land
261    # uses s1500t_17x51 configuration
262    # example for running on c17-c20 using arrayd
263    
264    cd MITgcm/verification/global_ocean.cs32x15/code
265    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
266    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
267    \cp SIZE.h_375 SIZE.h
268    \cp packages.conf_hr packages.conf
269    
270    cd ../build
271    \rm *
272    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
273    make depend
274    make -j
275    
276  cd ..  cd ..
277  mkdir build  mkdir run
278  cd build  cd run
279  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  \rm *
280    \cp ../input/* .
281    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
282    ln -sf ../../../../run_template/* .
283    \rm pickup*
284    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
285    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
286    \cp ../build/mitgcmuv .
287    job_c20_375cpu < /dev/null >&! output.run &
288    
289    
290    ##########################################################################
291    ##########################################################################
292    # 510*510*6*50, 1500-tile, 375-cpu, excludes land
293    # uses s1500t_17x51 configuration
294    # example for running on c17-c20 using arrayd
295    
296    cd MITgcm/verification/global_ocean.cs32x15/code
297    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
298    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
299    \cp SIZE.h_375 SIZE.h
300    \cp packages.conf_hr packages.conf
301    
302    cd ../build
303    \rm *
304    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
305  make depend  make depend
306  make  make -j
307    
308  cd ..  cd ..
309  mkdir run  mkdir run
310  cd run  cd run
311    \rm *
312  \cp ../input/* .  \cp ../input/* .
313  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
314  \cp data_hr data  ln -sf ../../../../run_template/* .
315  \ln -sf ../../../../run_template/tile00* .  \rm pickup*
316  \ln -sf ../../../../run_template/LEV* .  ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
317  \ln -sf ../../../../run_template/BATHY_18360x85_filled.bin .  ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
318  qsub job_orion  \cp ../build/mitgcmuv .
319    job_c20_375cpu < /dev/null >&! output.run &
320    
321    
322  ##########################################################################  ##########################################################################
323  ##########################################################################  ##########################################################################
324  # 510*510*6*50, 216-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 500-cpu, excludes land
325    # uses s1500t_17x51 configuration
326    # example for running on c17-c20 using arrayd
327    
328    cd MITgcm/verification/global_ocean.cs32x15/code
329    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
330    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
331    \cp SIZE.h_500 SIZE.h
332    \cp packages.conf_hr packages.conf
333    
334    cd ../build
335    \rm *
336    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
337    make depend
338    make -j
339    
340    cd ..
341    mkdir run
342    cd run
343    \rm *
344    \cp ../input/* .
345    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
346    ln -sf ../../../../run_template/* .
347    \rm pickup*
348    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
349    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
350    \cp ../build/mitgcmuv .
351    job_c19_500cpu < /dev/null >&! output.run &
352    
353  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  
354  cvs login ( CVS password: cvsanon )  ##########################################################################
355  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice  ##########################################################################
356  cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods  # 510*510*6*50, 216-cpu cube sphere on cosmos
 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter  
 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input  
 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results  
 cvs co -r checkpoint52d_pre MITgcm_code  
 cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15  
357    
358  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
359  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
360  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
361  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_216 SIZE.h
362  \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  \cp packages.conf_hr packages.conf
363  \rm mdsio_readfield.F  
364    module unload latest_intel80
365    module unload mpich-gm-intel80
366    module load latest_intel81
367    module load mpich-gm-intel81
368    
369    cd ../build
370    \rm *
371    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia32_ifort+mpi_cosmos
372    make depend
373    make -j
374    
375    cd ..
376    mkdir run
377    cd run
378    \rm *
379    \cp ../input/* .
380    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
381    ln -sf ../../../../run_template/* .
382    \rm pickup*
383    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
384    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
385    \cp ../build/mitgcmuv .
386    bsub < job_cosmos
387    
388    
389    ##########################################################################
390    ##########################################################################
391    # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
392    # requires input files in sudirectories run_template and ncep_rgau
393    # presently residing under orion:/tmp1/dmenem/cube
394    
395    cd MITgcm/verification/global_ocean.cs32x15/code
396    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
397    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
398    \cp SIZE.h_54 SIZE.h
399    \cp packages.conf_hr packages.conf
400    
401    cd ../build
402    \rm *
403    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
404    make depend
405    make -j
406    
407    cd ..
408    mkdir run
409    cd run
410    \rm *
411    \cp ../input/* .
412    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
413    qsub job_orion
414    
415    
416    ##########################################################################
417    ##########################################################################
418    # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
419    # requires input files in sudirectories run_template and ncep_rgau
420    # presently residing under orion:/tmp1/dmenem/cube
421    
422    cd MITgcm/verification/global_ocean.cs32x15/code
423    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
424    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
425    \cp SIZE.h_41 SIZE.h
426    \cp packages.conf_hr packages.conf
427    
428    cd ../build
429    \rm *
430    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
431    make depend
432    make -j
433    
434  cd ..  cd ..
435  mkdir build  mkdir run
436  cd build  cd run
437  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  \rm *
438    \cp ../input/* .
439    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
440    qsub job_orion41
441    
442    
443    ##########################################################################
444    ##########################################################################
445    # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
446    # requires input files in sudirectories run_template and ncep_rgau
447    # presently residing under orion:/tmp1/dmenem/cube
448    
449    cd MITgcm/verification/global_ocean.cs32x15/code
450    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
451    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
452    \cp SIZE.h_50 SIZE.h
453    \cp packages.conf_hr packages.conf
454    
455    cd ../build
456    \rm *
457    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
458  make depend  make depend
459  make  make -j
460    
461  cd ..  cd ..
462  mkdir run  mkdir run
463  cd run  cd run
464    \rm *
465  \cp ../input/* .  \cp ../input/* .
466  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
 \cp data_hr data  
 \cp data.pkg_hr data.pkg  
 \ln -sf ../../../../run_template/tile00* .  
 \ln -sf ../../../../run_template/LEV* .  
 \ln -sf ../../../../run_template/BATHY_18360x85_filled.bin .  
467  qsub job_orion  qsub job_orion
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