| 1 |
% |
| 2 |
% Ed Hill |
| 3 |
% Mon Aug 2 23:43:41 EDT 2004 |
| 4 |
% |
| 5 |
|
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matlab -nojvm -nodisplay |
| 7 |
|
| 8 |
clear all ; close all |
| 9 |
|
| 10 |
% Get the 1-yr list of days |
| 11 |
load ilist |
| 12 |
deltatT = 1200; % model time step size (s) |
| 13 |
tavefreq = 259200; % averaging period (s) |
| 14 |
startDate = datenum(1992,1,1); % model integration starting date |
| 15 |
for iy = 1992:2004 |
| 16 |
fid = fopen(sprintf('ilist_%d.txt',iy),'w'); |
| 17 |
for it = 1:length(ilist) |
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iter = ilist(it); |
| 19 |
dv = datevec(startDate + (iter*deltatT-tavefreq/2)/60/60/24); |
| 20 |
newyear = dv(1); |
| 21 |
if newyear == iy |
| 22 |
a = sprintf('%10.10d %d',iter,dv(1)); |
| 23 |
fprintf(fid,'%s\n',a); |
| 24 |
end |
| 25 |
end |
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fclose(fid); |
| 27 |
end |
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|
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|
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clear all ; close all |
| 31 |
nlay = 50; |
| 32 |
ne = 510; |
| 33 |
|
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Spat = 'Stave/data/Stave.%10.10d.data'; |
| 35 |
Tpat = 'Ttave/data/Ttave.%10.10d.data'; |
| 36 |
Upat = '_Veltave/data/uVeltave.%10.10d.data'; |
| 37 |
Vpat = '_Veltave/data/vVeltave.%10.10d.data'; |
| 38 |
|
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load ilist |
| 40 |
|
| 41 |
calcUVBave(Spat, Tpat, Upat, Vpat, ilist, nlay, ne) |
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|
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|
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|
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#======= split into 4 nodes (3 each) ======= |
| 46 |
cat ilist_199[2-4].txt | awk '{print $1}' > ilist_92--94 |
| 47 |
cat ilist_199[5-7].txt | awk '{print $1}' > ilist_95--97 |
| 48 |
cat ilist_199[89].txt ilist_2000.txt | awk '{print $1}' > ilist_98--00 |
| 49 |
cat ilist_200[1-3].txt | awk '{print $1}' > ilist_01--03 |
| 50 |
wc -l ilist_??--?? |
| 51 |
scp ilist_??--?? ta54: |
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|
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#======= split into 6 nodes (2 each) ======= |
| 54 |
cat ilist_1992.txt ilist_1993.txt | awk '{print $1}' > ilist_40 |
| 55 |
cat ilist_1994.txt ilist_1995.txt | awk '{print $1}' > ilist_41 |
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cat ilist_1996.txt ilist_1997.txt | awk '{print $1}' > ilist_42 |
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cat ilist_1998.txt ilist_1999.txt | awk '{print $1}' > ilist_43 |
| 58 |
cat ilist_2000.txt ilist_2001.txt | awk '{print $1}' > ilist_44 |
| 59 |
cat ilist_2002.txt ilist_2003.txt | awk '{print $1}' > ilist_45 |
| 60 |
wc -l ilist_4[0-5] |
| 61 |
scp ilist_4[0-5] ta54: |
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|
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|
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% /scratch/edhill/matlab_r13/bin/matlab -nojvm -nodisplay |
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matlab -nojvm -nodisplay |
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clear all ; close all |
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nlay = 50; |
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ne = 510; |
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|
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Spat = 'c5l/Stave/data/Stave.%10.10d.data'; |
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Tpat = 'c5l/Ttave/data/Ttave.%10.10d.data'; |
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Upat = 'c5l/_Veltave/data/uVeltave.%10.10d.data'; |
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Vpat = 'c5l/_Veltave/data/vVeltave.%10.10d.data'; |
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load ilist |
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|
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!/sbin/ifconfig eth0 | grep 'inet addr:' | sed -e 's|\.| |g' | awk '{print $5}' > myip |
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load myip |
| 78 |
ips = [ myip 201 200 200 200 ] |
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|
| 80 |
calcUVBave_ttcp(ips, Spat, Tpat, Upat, Vpat, ilist, nlay, ne) |
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|
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|
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|
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% Testing only |
| 85 |
matlab -nojvm |
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clear all ; close all |
| 87 |
|
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ufid = fopen('uVeltave.0000000432.data', 'r', 'ieee-be'); |
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vfid = fopen('vVeltave.0000000432.data', 'r', 'ieee-be'); |
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|
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ne = 510; |
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nps = 6 * ne*ne; |
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tx = 85; |
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ty = 85; |
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nt = ne*ne*6/(tx*ty); |
| 96 |
ucube = unmangleJPL1( ... |
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reshape(fread(ufid, nps, 'real*4'),tx*nt,ty), ne, tx ); |
| 98 |
vcube = unmangleJPL1( ... |
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reshape(fread(vfid, nps, 'real*4'),tx*nt,ty), ne, tx ); |
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|
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% Fill the (ne+1)*(ne+1) grid with T,S,B values |
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ni = ne; nip1 = ni + 1; |
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nj = ne; njp1 = nj + 1; |
| 104 |
ucubep1 = zeros( [ nip1 njp1 6 ] ); |
| 105 |
vcubep1 = zeros( [ nip1 njp1 6 ] ); |
| 106 |
for icf = 1:6 |
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ucubep1(2:nip1,2:njp1,icf) = ucube(:,:,icf); |
| 108 |
vcubep1(2:nip1,2:njp1,icf) = vcube(:,:,icf); |
| 109 |
end |
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|
| 111 |
% Do the upwind-edge U,V exchanges |
| 112 |
ucubep1(1,2:njp1,1) = vcube(ni:-1:1,nj,5); % - |
| 113 |
surf(ucubep1(1:10,:,1)), shading interp, view(2) |
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|
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ucubep1(2:nip1,1,1) = ucube(1:ni,nj,6); % - |
| 116 |
surf(ucubep1(:,1:10,1)), shading interp, view(2) |
| 117 |
|
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ucubep1(1,2:njp1,2) = ucube(ni,1:nj,1); % - |
| 119 |
surf(ucubep1(1:10,:,2)), shading interp, view(2) |
| 120 |
|
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ucubep1(2:nip1,1,2) = -vcube(ni,nj:-1:1,6); % - |
| 122 |
surf(ucubep1(:,1:10,2)), shading interp, view(2) |
| 123 |
|
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ucubep1(1,2:njp1,3) = ucube(ni:-1:1,nj,1); % - |
| 125 |
surf(ucubep1(1:10,:,3)), shading interp, view(2) |
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|
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ucubep1(2:nip1,1,3) = ones(size( ucube(1:ni,nj,2) )); |
| 128 |
ucubep1(2:nip1,1,3) = ucube(1:ni,nj,2); % - ?????? +++ |
| 129 |
surf(ucubep1(:,1:5,3)), shading interp, view(2) |
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|
| 131 |
ucubep1(1,2:njp1,4) = ucube(ni,1:nj,3); % - |
| 132 |
surf(ucubep1(1:10,:,4)), shading interp, view(2) |
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|
| 134 |
ucubep1(2:nip1,1,4) = -vcube(ni,nj:-1:1,2); % - |
| 135 |
surf(ucubep1(:,1:10,4)), shading interp, view(2) |
| 136 |
|
| 137 |
ucubep1(1,2:njp1,5) = vcube(ni:-1:1,nj,3); % - |
| 138 |
surf(ucubep1(1:10,:,5)), shading interp, view(2) |
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|
| 140 |
ucubep1(2:nip1,1,5) = ucube(1:ni,nj,4); % - |
| 141 |
surf(ucubep1(:,1:10,5)), shading interp, view(2) |
| 142 |
|
| 143 |
ucubep1(1,2:njp1,6) = ucube(ni,1:nj,5); % - |
| 144 |
surf(ucubep1(1:10,:,6)), shading interp, view(2) |
| 145 |
|
| 146 |
ucubep1(2:nip1,1,6) = -vcube(ni,nj:-1:1,4); % - |
| 147 |
surf(ucubep1(:,1:10,6)), shading interp, view(2) |
| 148 |
|
| 149 |
|
| 150 |
vcubep1(1,2:njp1,1) = -ucube(ni:-1:1,nj,5); % - |
| 151 |
surf(vcubep1(1:10,:,1)), shading interp, view(2) |
| 152 |
|
| 153 |
vcubep1(2:nip1,1,1) = vcube(1:ni,nj,6); % - |
| 154 |
surf(vcubep1(:,1:10,1)), shading interp, view(2) |
| 155 |
|
| 156 |
vcubep1(1,2:njp1,2) = vcube(ni,1:nj,1); % - |
| 157 |
surf(vcubep1(1:10,:,2)), shading interp, view(2) |
| 158 |
|
| 159 |
vcubep1(2:nip1,1,2) = ucube(ni,nj:-1:1,6); % - |
| 160 |
surf(vcubep1(:,1:10,2)), shading interp, view(2) |
| 161 |
|
| 162 |
vcubep1(1,2:njp1,3) = -ucube(ni:-1:1,nj,1); % - ?????? +++ |
| 163 |
surf(vcubep1(1:4,:,3)), shading interp, view(2) |
| 164 |
|
| 165 |
vcubep1(2:nip1,1,3) = vcube(1:ni,nj,2); % - ?????? +++ |
| 166 |
surf(vcubep1(:,1:5,3)), shading interp, view(2) |
| 167 |
|
| 168 |
vcubep1(1,2:njp1,4) = vcube(ni,1:nj,3); % - |
| 169 |
surf(vcubep1(1:10,:,4)), shading interp, view(2) |
| 170 |
|
| 171 |
vcubep1(2:nip1,1,4) = ucube(ni,nj:-1:1,2); % - |
| 172 |
surf(vcubep1(:,1:10,4)), shading interp, view(2) |
| 173 |
|
| 174 |
vcubep1(1,2:njp1,5) = -ucube(ni:-1:1,nj,3); % - |
| 175 |
surf(vcubep1(1:10,:,5)), shading interp, view(2) |
| 176 |
|
| 177 |
vcubep1(2:nip1,1,5) = vcube(1:ni,nj,4); % - |
| 178 |
surf(vcubep1(:,1:10,5)), shading interp, view(2) |
| 179 |
|
| 180 |
vcubep1(1,2:njp1,6) = vcube(ni,1:nj,5); % - |
| 181 |
surf(vcubep1(1:10,:,6)), shading interp, view(2) |
| 182 |
|
| 183 |
vcubep1(2:nip1,1,6) = ucube(ni,nj:-1:1,4); % - |
| 184 |
surf(vcubep1(:,1:10,6)), shading interp, view(2) |
| 185 |
|
| 186 |
% Do the "n+1" U exchanges |
| 187 |
ucubep1(1,2:njp1,1) = vcube(ni:-1:1,nj,5); % - |
| 188 |
ucubep1(2:nip1,1,1) = ucube(1:ni,nj,6); % - |
| 189 |
ucubep1(1,2:njp1,2) = ucube(ni,1:nj,1); % - |
| 190 |
ucubep1(2:nip1,1,2) = -vcube(ni,nj:-1:1,6); % - |
| 191 |
ucubep1(1,2:njp1,3) = ucube(ni:-1:1,nj,1); % - |
| 192 |
ucubep1(2:nip1,1,3) = ucube(1:ni,nj,2); % - ?????? +++ |
| 193 |
ucubep1(1,2:njp1,4) = ucube(ni,1:nj,3); % - |
| 194 |
ucubep1(2:nip1,1,4) = -vcube(ni,nj:-1:1,2); % - |
| 195 |
ucubep1(1,2:njp1,5) = vcube(ni:-1:1,nj,3); % - |
| 196 |
ucubep1(2:nip1,1,5) = ucube(1:ni,nj,4); % - |
| 197 |
ucubep1(1,2:njp1,6) = ucube(ni,1:nj,5); % - |
| 198 |
ucubep1(2:nip1,1,6) = -vcube(ni,nj:-1:1,4); % - |
| 199 |
|
| 200 |
% Do the "n+1" V exchanges |
| 201 |
vcubep1(1,2:njp1,1) = -ucube(ni:-1:1,nj,5); % - |
| 202 |
vcubep1(2:nip1,1,1) = vcube(1:ni,nj,6); % - |
| 203 |
vcubep1(1,2:njp1,2) = vcube(ni,1:nj,1); % - |
| 204 |
vcubep1(2:nip1,1,2) = ucube(ni,nj:-1:1,6); % - |
| 205 |
vcubep1(1,2:njp1,3) = -ucube(ni:-1:1,nj,1); % - ?????? +++ |
| 206 |
vcubep1(2:nip1,1,3) = vcube(1:ni,nj,2); % - ?????? +++ |
| 207 |
vcubep1(1,2:njp1,4) = vcube(ni,1:nj,3); % - |
| 208 |
vcubep1(2:nip1,1,4) = ucube(ni,nj:-1:1,2); % - |
| 209 |
vcubep1(1,2:njp1,5) = -ucube(ni:-1:1,nj,3); % - |
| 210 |
vcubep1(2:nip1,1,5) = vcube(1:ni,nj,4); % - |
| 211 |
vcubep1(1,2:njp1,6) = vcube(ni,1:nj,5); % - |
| 212 |
vcubep1(2:nip1,1,6) = ucube(ni,nj:-1:1,4); % - |
| 213 |
|
| 214 |
|
| 215 |
|
| 216 |
matlab -nojvm |
| 217 |
clear all ; close all |
| 218 |
|
| 219 |
ufid = fopen('uVeltave.0000000432.data', 'r', 'ieee-be'); |
| 220 |
vfid = fopen('vVeltave.0000000432.data', 'r', 'ieee-be'); |
| 221 |
|
| 222 |
ne = 510; |
| 223 |
nps = 6 * ne*ne; |
| 224 |
tx = 85; |
| 225 |
ty = 85; |
| 226 |
nt = ne*ne*6/(tx*ty); |
| 227 |
ucube = unmangleJPL1( ... |
| 228 |
reshape(fread(ufid, nps, 'real*4'),tx*nt,ty), ne, tx ); |
| 229 |
vcube = unmangleJPL1( ... |
| 230 |
reshape(fread(vfid, nps, 'real*4'),tx*nt,ty), ne, tx ); |
| 231 |
fclose(ufid); |
| 232 |
fclose(vfid); |
| 233 |
|
| 234 |
% ucube(find(ucube == 0.0)) = NaN; |
| 235 |
% vcube(find(vcube == 0.0)) = NaN; |
| 236 |
|
| 237 |
% surf(ucube(:,:,1)), view(2), shading interp |
| 238 |
% ucn = ucube; |
| 239 |
% ucn(find(ucn == 0.0)) = NaN; |
| 240 |
% figure(1) |
| 241 |
% surf(ucn(:,:,1)), view(2), shading interp |
| 242 |
% figure(2) |
| 243 |
% surf(ucn(1:10,:,1)), view(2), shading interp |
| 244 |
% u = permute(ucn,[2,1,3]); |
| 245 |
% surf(u(:,:,1)), view(2), shading interp |
| 246 |
|
| 247 |
|
| 248 |
% Fill the (ne+1)*(ne+1) grid with U,V values |
| 249 |
ni = ne; nip1 = ni + 1; |
| 250 |
nj = ne; njp1 = nj + 1; |
| 251 |
ucubep1 = ones( [ nip1 nj 6 ] ); |
| 252 |
vcubep1 = ones( [ ni njp1 6 ] ); |
| 253 |
for icf = 1:6 |
| 254 |
ucubep1(1:ni,1:nj,icf) = ucube(:,:,icf); |
| 255 |
vcubep1(1:ni,1:nj,icf) = vcube(:,:,icf); |
| 256 |
end |
| 257 |
|
| 258 |
% Do the "n+1" U exchanges |
| 259 |
subplot(2,1,1), surf(ucubep1((nip1-10):nip1,:,1)), view(2), shading interp |
| 260 |
ucubep1(nip1,:,1) = ucube(1,:,2); % - |
| 261 |
subplot(2,1,2), surf(ucubep1((nip1-10):nip1,:,1)), view(2), shading interp |
| 262 |
|
| 263 |
subplot(2,1,1), surf(ucubep1((nip1-10):nip1,:,2)), view(2), shading interp |
| 264 |
ucubep1(nip1,:,2) = vcube(ne:-1:1,1,4); % - |
| 265 |
subplot(2,1,2), surf(ucubep1((nip1-10):nip1,:,2)), view(2), shading interp |
| 266 |
|
| 267 |
subplot(2,1,1), surf(ucubep1((nip1-10):nip1,:,3)), view(2), shading interp |
| 268 |
ucubep1(nip1,:,3) = ucube(1,:,4); % - |
| 269 |
subplot(2,1,2), surf(ucubep1((nip1-10):nip1,:,3)), view(2), shading interp |
| 270 |
|
| 271 |
subplot(2,1,1), surf(ucubep1((nip1-10):nip1,:,4)), view(2), shading interp |
| 272 |
ucubep1(nip1,:,4) = vcube(ne:-1:1,1,6); % - |
| 273 |
subplot(2,1,2), surf(ucubep1((nip1-10):nip1,:,4)), view(2), shading interp |
| 274 |
|
| 275 |
subplot(2,1,1), surf(ucubep1((nip1-10):nip1,:,5)), view(2), shading interp |
| 276 |
ucubep1(nip1,:,5) = ucube(1,:,6); % - |
| 277 |
subplot(2,1,2), surf(ucubep1((nip1-10):nip1,:,5)), view(2), shading interp |
| 278 |
|
| 279 |
subplot(2,1,1), surf(ucubep1((nip1-10):nip1,:,6)), view(2), shading interp |
| 280 |
ucubep1(nip1,:,6) = vcube(ne:-1:1,1,2); % - |
| 281 |
subplot(2,1,2), surf(ucubep1((nip1-10):nip1,:,6)), view(2), shading interp |
| 282 |
|
| 283 |
|
| 284 |
% Do the "n+1" V exchanges |
| 285 |
subplot(1,2,1), surf(vcubep1(:,(njp1-10):nip1,1)), view(2), shading interp |
| 286 |
vcubep1(:,nip1,1) = ucube(1,ne:-1:1,3); % - |
| 287 |
subplot(1,2,2), surf(vcubep1(:,(nip1-10):nip1,1)), view(2), shading interp |
| 288 |
|
| 289 |
subplot(1,2,1), surf(vcubep1(:,(nip1-10):nip1,2)), view(2), shading interp |
| 290 |
vcubep1(:,nip1,2) = vcube(1,:,3); % - |
| 291 |
subplot(1,2,2), surf(vcubep1(:,(nip1-10):nip1,2)), view(2), shading interp |
| 292 |
|
| 293 |
subplot(1,2,1), surf(vcubep1(:,(nip1-10):nip1,3)), view(2), shading interp |
| 294 |
vcubep1(:,nip1,3) = ucube(1,ne:-1:1,5); % - |
| 295 |
subplot(1,2,2), surf(vcubep1(:,(nip1-10):nip1,3)), view(2), shading interp |
| 296 |
|
| 297 |
subplot(1,2,1), surf(vcubep1(:,(nip1-10):nip1,4)), view(2), shading interp |
| 298 |
vcubep1(:,nip1,4) = vcube(:,1,5); % - |
| 299 |
subplot(1,2,2), surf(vcubep1(:,(nip1-10):nip1,4)), view(2), shading interp |
| 300 |
|
| 301 |
subplot(1,2,1), surf(vcubep1(:,(nip1-10):nip1,5)), view(2), shading interp |
| 302 |
vcubep1(:,nip1,5) = ucube(1,ne:-1:1,1); % - |
| 303 |
subplot(1,2,2), surf(vcubep1(:,(nip1-10):nip1,5)), view(2), shading interp |
| 304 |
|
| 305 |
subplot(1,2,1), surf(vcubep1(:,(nip1-10):nip1,6)), view(2), shading interp |
| 306 |
vcubep1(:,nip1,6) = vcube(:,1,1); % - |
| 307 |
subplot(1,2,2), surf(vcubep1(:,(nip1-10):nip1,6)), view(2), shading interp |
| 308 |
|
| 309 |
|
| 310 |
% Do the "n+1" U exchanges |
| 311 |
ucubep1(nip1,:,1) = ucube(1,:,2); % - |
| 312 |
ucubep1(nip1,:,2) = vcube(ne:-1:1,1,4); % - |
| 313 |
ucubep1(nip1,:,3) = ucube(1,:,4); % - |
| 314 |
ucubep1(nip1,:,4) = vcube(ne:-1:1,1,6); % - |
| 315 |
ucubep1(nip1,:,5) = ucube(1,:,6); % - |
| 316 |
ucubep1(nip1,:,6) = vcube(ne:-1:1,1,2); % - |
| 317 |
|
| 318 |
% Do the "n+1" V exchanges |
| 319 |
vcubep1(:,nip1,1) = ucube(1,ne:-1:1,3); % - |
| 320 |
vcubep1(:,nip1,2) = vcube(1,:,3); % - |
| 321 |
vcubep1(:,nip1,3) = ucube(1,ne:-1:1,5); % - |
| 322 |
vcubep1(:,nip1,4) = vcube(:,1,5); % - |
| 323 |
vcubep1(:,nip1,5) = ucube(1,ne:-1:1,1); % - |
| 324 |
vcubep1(:,nip1,6) = vcube(:,1,1); % - |
| 325 |
|
| 326 |
masku = 1.0 - abs(diff(double(ucubep1(:,:,:) == 0.0),1,1)); |
| 327 |
% surf(masku(:,:,1)), view(2), shading interp |
| 328 |
|
| 329 |
maskv = 1.0 - abs(diff(double(vcubep1(:,:,:) == 0.0),1,2)); |
| 330 |
% surf(maskv(:,:,1)), view(2), shading interp |
| 331 |
|
| 332 |
diffu = 0.5*diff(ucubep1(:,:,:),1,1); |
| 333 |
diffv = 0.5*diff(vcubep1(:,:,:),1,2); |
| 334 |
uont = ucube(:,:,:) + masku.*diffu; |
| 335 |
vont = vcube(:,:,:) + maskv.*diffv; |
| 336 |
|
| 337 |
surf(uont(:,:,1)), view(2), shading interp |
| 338 |
uontn = uont; |
| 339 |
uontn(find(uontn == 0.0)) = NaN; |
| 340 |
surf(uontn(:,:,1)), view(2), shading interp |
| 341 |
|
| 342 |
surf(vont(:,:,1)), view(2), shading interp |
| 343 |
vontn = vont; |
| 344 |
vontn(find(vontn == 0.0)) = NaN; |
| 345 |
surf(vontn(:,:,1)), view(2), shading interp |
| 346 |
|
| 347 |
|
| 348 |
|
| 349 |
matlab -nojvm -nodisplay |
| 350 |
clear all ; close all |
| 351 |
nlay = 50; |
| 352 |
ne = 510; |
| 353 |
|
| 354 |
Spat = 'Stave/data/Stave.%10.10d.data'; |
| 355 |
Tpat = 'Ttave/data/Ttave.%10.10d.data'; |
| 356 |
Upat = '_Veltave/data/uVeltave.%10.10d.data'; |
| 357 |
Vpat = '_Veltave/data/vVeltave.%10.10d.data'; |
| 358 |
|
| 359 |
load ilist |
| 360 |
|
| 361 |
calcUVB2_NFS(Spat, Tpat, Upat, Vpat, ilist, nlay, ne) |
| 362 |
|
| 363 |
|
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