--- MITgcm_contrib/jmc_script/README	2010/04/25 23:42:07	1.14
+++ MITgcm_contrib/jmc_script/README	2023/07/19 14:04:48	1.21
@@ -17,10 +17,10 @@
 - do_test_2+2 -help -> print "usage"
 
 NOTE: scripts "tst_2+2" & "do_test_2+2" have been moved (Dec 25, 2007)
- to: MITgcm/tools
+ to: MITgcm/tools/
 
 script: tst_2+2_cpl
- = version of tst_2+2 adapted for coupled set-up (verification/cpl_aim+ocn)
+ = version of tst_2+2 adapted for coupled set-up (e.g., verification/cpl_aim+ocn)
 
 b) PBS-batch script that re-submit itself (loop).
 script: runScript
@@ -56,3 +56,34 @@
 f) script: derive_other_types
   from 1 src file, derive other type (R4,RS,RL,RS) version. For now, can
   only be applied to the 4 src files: "mdsio_pass_r{4,8}tor{l,s}.F"
+
+g) script: mk_options_list
+  generate list of CPP Options used in Fortran source files
+
+h) script: comp_res
+  to compare MONITOR output from 2 STDOUT files (outside of testreport).
+  Note: use executable "cmpnum" compiled from tiny fortran code: cmpnum.f
+
+i) script: mod
+  to perform automatic substitution (useful to maintain src code) using
+  command "sed" and set of rules from file (default rule file: "mod.sed")
+
+----------------------------------------------------------------------
+shell & matlab scripts to process MONITOR output from STDOUT files
+ and make simple time-serie plots:
+--------------------
+a) shell script: select_MON
+ get all MONITOR output from a single file and split into many
+ single-variable output files (easier to load and plot)
+
+b) shell scripts: do_extract_MON & extract_MON
+ collect into a single file all MONITOR output from consecutive
+ STDOUT output files (from a single experiment with one of more restart)
+
+c) matlab script: grph_MON.m
+ plot MONITOR time-serie of one or more experiment (with lines of different
+ color). Note: experiment with larger number of records needs to come first.
+Uses: read_MON.m
+ to load-in single-variable output files (--> many files per experiment)
+and/or: readnc_MON.m
+ to load-in netcdf (MNC) MONITOR output files