/[MITgcm]/MITgcm_contrib/llc_hires/llc_2160/readme.txt
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revision 1.13 by dimitri, Wed Oct 17 13:22:24 2018 UTC revision 1.15 by dimitri, Fri Nov 2 14:57:07 2018 UTC
# Line 1  Line 1 
1  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
2  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M YOUR_EMAIL_HERE  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe
3  qsub -I -q normal -l select=103:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M YOUR_EMAIL_HERE  qsub -I -q normal -l select=103:ncpus=20:model=ivy,walltime=8:00:00 -m abe
4  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M YOUR_EMAIL_HERE  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe
5  qsub -I -q long -l select=103:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M YOUR_EMAIL_HERE  qsub -I -q long -l select=103:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe
6    
7    ##########################
8    # 72x72_7666 configuration
9    qsub -I -q long -l select=400:ncpus=20:model=ivy,walltime=120:00:00 -m abe
10    module purge
11    module load comp-intel/2016.2.181 mpi-hpe/mpt.2.17r13 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
12    cd ~/llc_2160
13    git clone git@github.com:MITgcm/MITgcm.git
14    cvs co MITgcm_contrib/llc_hires/llc_2160
15    cd ~/llc_2160/MITgcm
16    mkdir build run
17    cd ~/llc_2160/MITgcm/build
18    cp ../../MITgcm_contrib/llc_hires/llc_2160/code/SIZE.h_72x72_7666 SIZE.h
19    ../tools/genmake2 -of \
20     ../../MITgcm_contrib/llc_hires/llc_2160/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
21     '../../MITgcm_contrib/llc_hires/llc_2160/code ../../MITgcm_contrib/llc_hires/llc_2160/code-async'
22    make depend
23    make -j 16
24    
25    cd ~/llc_2160/MITgcm/run
26    cp ../build/mitgcmuv mitgcmuv_72x72_7666
27    ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .
28    ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
29    cp ../../MITgcm_contrib/llc_hires/llc_2160/input/* .
30    cp data.exch2_72x72x7666 data.exch2
31    emacs data
32    
33    mpiexec -n 8000 ./mitgcmuv_72x72_7666
34    
35    tail -f STDOUT.00000 | grep advcfl_W
36    
37    ###################################################################
38    # 90x90_5004 configuration with newer code on electra special queue
39    qsub -I -q electra -l select=200:ncpus=28:model=bro_ele:aoe=sles12 -l walltime=10:00:00
40    module purge
41    module load comp-intel/2016.2.181 mpi-hpe/mpt.2.17r13 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
42    cd ~/llc_2160
43    git clone git@github.com:MITgcm/MITgcm.git
44    cvs co MITgcm_contrib/llc_hires/llc_2160
45    cd ~/llc_2160/MITgcm
46    mkdir build run
47    cd ~/llc_2160/MITgcm/build
48    cp ../../MITgcm_contrib/llc_hires/llc_2160/code/SIZE.h_90x90_5004 SIZE.h
49    ../tools/genmake2 -of \
50     ../../MITgcm_contrib/llc_hires/llc_2160/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
51     '../../MITgcm_contrib/llc_hires/llc_2160/code ../../MITgcm_contrib/llc_hires/llc_2160/code-async'
52    make depend
53    make -j 16
54    
55    cd ~/llc_2160/MITgcm/run
56    cp ../build/mitgcmuv mitgcmuv_90x90_5004
57    ln -sf /nobackup/dmenemen/tarballs/llc_2160/run_template/* .
58    ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
59    cp ../../MITgcm_contrib/llc_hires/llc_2160/input/* .
60    cp ../../MITgcm_contrib/llc_hires/llc_2160/input/data.exch2_90x90x5004 data.exch2
61    emacs data
62    
63    mpiexec -n 5500 ./mitgcmuv_90x90_5004
64    
65    tail -f STDOUT.00000 | grep advcfl_W
66    
67  #############################  #############################
68  # 60x60x10882 configuration  # 60x60x10882 configuration
69    
70  qsub -I -q long -l select=600:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M YOUR_EMAIL_HERE  qsub -I -q long -l select=600:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe
71  module purge  module purge
72  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.10r6 netcdf/4.0  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.10r6 netcdf/4.0
73  cd ~/llc_2160  cd ~/llc_2160
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