/[MITgcm]/MITgcm_contrib/llc_hires/llc_4320/readme.txt
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revision 1.1 by dimitri, Fri Sep 20 12:38:03 2013 UTC revision 1.7 by dimitri, Mon Nov 4 16:06:42 2013 UTC
# Line 1  Line 1 
1  For interactive session, Ivy Bridge nodes:  For interactive session, Ivy Bridge nodes:
2  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00  qsub -I -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 -m abe -M email
3  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00  qsub -I -q normal -l select=300:ncpus=20:model=ivy,walltime=8:00:00 -m abe -M email
4  qsub -I -q long -l select=300:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00  qsub -I -q long -l select=300:ncpus=20:model=ivy,walltime=120:00:00 -m abe -M email
5  qsub -I -q normal -l select=300:ncpus=20:model=ivy,walltime=8:00:00  qsub -I -q long -l select=300:ncpus=20:model=ivy,min_walltime=30:00,max_walltime=120:00:00 -m abe -M email
   
 For batch submission:  
 qsub -q devel -l select=300:ncpus=20:model=ivy,walltime=02:00:00 runscript  
 qsub qsub_llc2160.csh  
6    
7  ==============  ==============
8    
9    cd ~/llc_4320
10  cvs co MITgcm_code  cvs co MITgcm_code
11    cvs co MITgcm_contrib/llc_hires/llc_4320
12  cd MITgcm  cd MITgcm
13  module purge  module purge
14  module load comp-intel/2011.7.256 mpi-sgi/mpt.2.06r6 netcdf/4.0  module load comp-intel/2012.0.032 mpi-sgi/mpt.2.08r7 netcdf/4.0
15  mkdir build run  mkdir build run
16  lfs setstripe -c -1 /nobackupp5/dmenemen/llc_4320/MITgcm/run  lfs setstripe -c -1 run
17  cd build  cd build
18  ../tools/genmake2 -of ~/tarballs/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \  cp ../../MITgcm_contrib/llc_hires/llc_4320/code/SIZE.h_72x72x29297 SIZE.h
19   '/nobackup/dmenemen/tarballs/llc_4320/code /nobackup/dmenemen/tarballs/llc_4320/code-async'  ../tools/genmake2 -of \
20     ../../MITgcm_contrib/llc_hires/llc_4320/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
21     '../../MITgcm_contrib/llc_hires/llc_4320/code ../../MITgcm_contrib/llc_hires/llc_4320/code-async'
22  make depend  make depend
23  make -j 16  make -j 8
24  cd ../run  cd ../run
25  ln -sf ../build/mitgcmuv .  ln -sf ../build/mitgcmuv .
26  ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .  ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .
27  ln -sf /nobackup/dmenemen/forcing/era_interim/EIG_*_2* .  ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
28  ln -sf /nobackup/dmenemen/forcing/era_interim_corrected/EIG_dlw_sub5p_2* .  cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .
29  cp /nobackup/dmenemen/tarballs/llc_4320/input/* .  mv data.exch2_72x72x29297 data.exch2
30  mpiexec -n 6000 ./mitgcmuv  export MPI_NUM_MEMORY_REGIONS=256
31    mpiexec -n 35000 ./mitgcmuv
32    
33  ==============  ==============
34    
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