llc_hires/llc_90/readme.txt

# This is a small test case with set-up as similar as possible
# to llc_4320 for testing asyncio and coupling to GEOS-5.

# request interactive nodes and load modules
qsub -I -q long -l select=6:ncpus=28:model=bro,walltime=120:00:00
module purge
module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt

########################################
# 30x30x96 configuration without asyncio
cd ~/geos5/asyncio
cvs co MITgcm_code
cvs co MITgcm_contrib/llc_hires/llc_90
cd MITgcm
mkdir build run1
cd build
rm *
../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas \
 -mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code
make depend
make -j 96
cp mitgcmuv ../run1
cd ../run1
ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
mpiexec -n 96 ./mitgcmuv

#####################################
# 30x30x96 configuration with asyncio
cd ~/geos5/asyncio/MITgcm
mkdir run2
cd build
rm *
../tools/genmake2 -of \
 ../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
 '../../MITgcm_contrib/llc_hires/llc_90/code ../../MITgcm_contrib/llc_hires/llc_90/code-async'
make depend
make -j 96
cp mitgcmuv ../run2
cd ../run2
ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
mpiexec -n 124 ./mitgcmuv
1	dimitri	1.1	# This is a small test case with set-up as similar as possible
2			# to llc_4320 for testing asyncio and coupling to GEOS-5.
3
4	dimitri	1.3	# request interactive nodes and load modules
5	dimitri	1.2	qsub -I -q long -l select=6:ncpus=28:model=bro,walltime=120:00:00
6	dimitri	1.1	module purge
7	dimitri	1.2	module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
8	dimitri	1.3
9			########################################
10			# 30x30x96 configuration without asyncio
11	dimitri	1.2	cd ~/geos5/asyncio
12	dimitri	1.3	cvs co MITgcm_code
13	dimitri	1.2	cvs co MITgcm_contrib/llc_hires/llc_90
14	dimitri	1.1	cd MITgcm
15	dimitri	1.2	mkdir build run1
16	dimitri	1.1	cd build
17			rm *
18	dimitri	1.3	../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas \
19	dimitri	1.2	-mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code
20	dimitri	1.1	make depend
21	dimitri	1.2	make -j 96
22			cp mitgcmuv ../run1
23			cd ../run1
24			ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
25			ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
26			ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
27			cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
28			mpiexec -n 96 ./mitgcmuv
29	dimitri	1.1
30	dimitri	1.3	#####################################
31			# 30x30x96 configuration with asyncio
32	dimitri	1.2	cd ~/geos5/asyncio/MITgcm
33			mkdir run2
34			cd build
35			rm *
36			../tools/genmake2 -of \
37			../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \
38			'../../MITgcm_contrib/llc_hires/llc_90/code ../../MITgcm_contrib/llc_hires/llc_90/code-async'
39			make depend
40			make -j 96
41			cp mitgcmuv ../run2
42			cd ../run2
43			ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* .
44			ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
45			ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin .
46			cp ../../MITgcm_contrib/llc_hires/llc_90/input/* .
47			mpiexec -n 124 ./mitgcmuv