| 1 |
dimitri |
1.1 |
# This is a small test case with set-up as similar as possible |
| 2 |
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# to llc_4320 for testing asyncio and coupling to GEOS-5. |
| 3 |
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| 4 |
dimitri |
1.3 |
# request interactive nodes and load modules |
| 5 |
dimitri |
1.2 |
qsub -I -q long -l select=6:ncpus=28:model=bro,walltime=120:00:00 |
| 6 |
dimitri |
1.1 |
module purge |
| 7 |
dimitri |
1.2 |
module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt |
| 8 |
dimitri |
1.3 |
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| 9 |
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######################################## |
| 10 |
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# 30x30x96 configuration without asyncio |
| 11 |
dimitri |
1.6 |
cvs co MITgcm_code |
| 12 |
dimitri |
1.2 |
cvs co MITgcm_contrib/llc_hires/llc_90 |
| 13 |
dimitri |
1.1 |
cd MITgcm |
| 14 |
dimitri |
1.2 |
mkdir build run1 |
| 15 |
dimitri |
1.1 |
cd build |
| 16 |
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rm * |
| 17 |
dimitri |
1.3 |
../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas \ |
| 18 |
dimitri |
1.2 |
-mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code |
| 19 |
dimitri |
1.1 |
make depend |
| 20 |
dimitri |
1.4 |
make -j 16 |
| 21 |
dimitri |
1.2 |
cp mitgcmuv ../run1 |
| 22 |
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cd ../run1 |
| 23 |
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ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* . |
| 24 |
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ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* . |
| 25 |
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ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin . |
| 26 |
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cp ../../MITgcm_contrib/llc_hires/llc_90/input/* . |
| 27 |
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mpiexec -n 96 ./mitgcmuv |
| 28 |
dimitri |
1.1 |
|
| 29 |
dimitri |
1.3 |
##################################### |
| 30 |
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# 30x30x96 configuration with asyncio |
| 31 |
dimitri |
1.6 |
cd ../../MITgcm |
| 32 |
dimitri |
1.2 |
mkdir run2 |
| 33 |
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cd build |
| 34 |
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rm * |
| 35 |
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../tools/genmake2 -of \ |
| 36 |
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../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas -mpi -mods \ |
| 37 |
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'../../MITgcm_contrib/llc_hires/llc_90/code ../../MITgcm_contrib/llc_hires/llc_90/code-async' |
| 38 |
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make depend |
| 39 |
dimitri |
1.4 |
make -j 16 |
| 40 |
dimitri |
1.2 |
cp mitgcmuv ../run2 |
| 41 |
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cd ../run2 |
| 42 |
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ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* . |
| 43 |
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ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* . |
| 44 |
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ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin . |
| 45 |
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cp ../../MITgcm_contrib/llc_hires/llc_90/input/* . |
| 46 |
dimitri |
1.6 |
mv data_async data |
| 47 |
dimitri |
1.2 |
mpiexec -n 124 ./mitgcmuv |
| 48 |
dimitri |
1.4 |
|
| 49 |
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################################################### |
| 50 |
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# 30x30x96 configuration with asyncio and no seaice |
| 51 |
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mkdir run3 |
| 52 |
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cd build |
| 53 |
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rm * |
| 54 |
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../tools/genmake2 -of \ |
| 55 |
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../../MITgcm_contrib/llc_hires/llc_90/code-async/linux_amd64_ifort+mpi_ice_nas \ |
| 56 |
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-mpi -mods ../../MITgcm_contrib/llc_hires/llc_90/code-async-noseaice |
| 57 |
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make depend |
| 58 |
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make -j 16 |
| 59 |
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cp mitgcmuv ../run3 |
| 60 |
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cd ../run3 |
| 61 |
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ln -sf /nobackup/dmenemen/GEOS5/experiments/llc90/data/* . |
| 62 |
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ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* . |
| 63 |
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ln -sf /nobackupp2/dmenemen//llc_4320/run_template/runoff1p2472-360x180x12.bin . |
| 64 |
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cp ../../MITgcm_contrib/llc_hires/llc_90/input-noseaice/* . |
| 65 |
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mpiexec -n 124 ./mitgcmuv |
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