11 |
|
|
12 |
|
|
13 |
############################################################################# |
############################################################################# |
14 |
|
# 1-CPU verification/global_with_exf including pkg/diagnostics |
15 |
|
|
16 |
|
examples: |
17 |
|
aim.5l_cs/input/data.diagnostics fizhi-gridalt-hs/input/data.diagnostics |
18 |
|
dome/input/data.diagnostics hs94.cs-32x32x5/input/data.diagnostics |
19 |
|
|
20 |
|
e1=readbin('test_oldstyle/ETAtave.0000000018.data',[90 40]); |
21 |
|
e2=readbin('ETAN.0000000018.data',[90 40]); |
22 |
|
e16=readbin('test_oldstyle/Eta.0000000016.data',[90 40]); |
23 |
|
e17=readbin('test_oldstyle/Eta.0000000017.data',[90 40]); |
24 |
|
e18=readbin('test_oldstyle/Eta.0000000018.data',[90 40]); |
25 |
|
minmax(e1-e2) |
26 |
|
minmax(e2-(e16+e17+e18)/3) |
27 |
|
|
28 |
|
e1=readbin('test_oldstyle/sFluxtave.0000000018.data',[90 40]); |
29 |
|
e2=readbin('SFLUX.0000000018.data',[90 40]); |
30 |
|
minmax(e1-e2) |
31 |
|
|
32 |
|
e1=readbin('test_oldstyle/tFluxtave.0000000018.data',[90 40]); |
33 |
|
e2=readbin('TFLUX.0000000018.data',[90 40]); |
34 |
|
minmax(e1-e2) |
35 |
|
|
36 |
|
e1=readbin('TRELAX.0000000018.data',[90 40]); |
37 |
|
subplot(211),mypcolor(e1');colorbar |
38 |
|
|
39 |
|
e1=readbin('SRELAX.0000000018.data',[90 40]); |
40 |
|
subplot(211),mypcolor(e1');colorbar |
41 |
|
|
42 |
|
e1=readbin('TICE.0000000018.data',[90 40]); |
43 |
|
subplot(211),mypcolor(e1');colorbar |
44 |
|
|
45 |
|
|
46 |
|
e1=readbin('test_oldstyle/wVeltave.0000000018.data',[90 40 15]); |
47 |
|
e2=readbin('WVEL.0000000018.data',[90 40 15]); |
48 |
|
e16=readbin('test_oldstyle/W.0000000016.data',[90 40 15]); |
49 |
|
e17=readbin('test_oldstyle/W.0000000017.data',[90 40 15]); |
50 |
|
e18=readbin('test_oldstyle/W.0000000018.data',[90 40 15]); |
51 |
|
minmax(e1-e2) |
52 |
|
minmax(e2-(e16+e17+e18)/3) |
53 |
|
|
54 |
|
|
55 |
|
|
56 |
|
|
57 |
|
|
58 |
|
|
59 |
|
cd MITgcm/verification/global_with_exf/build |
60 |
|
\rm * |
61 |
|
\cp ../code/* . |
62 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf . |
63 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . |
64 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
65 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/DIAGNOSTICS_SIZE.h . |
66 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test1 . |
67 |
|
\mv SIZE.h_test1 SIZE.h |
68 |
|
../../../tools/genmake2 |
69 |
|
make depend |
70 |
|
make -j |
71 |
|
cd .. |
72 |
|
mkdir run |
73 |
|
cd run |
74 |
|
\rm * |
75 |
|
\cp ../build/mitgcmuv . |
76 |
|
\ln -sf ../input/* . |
77 |
|
\rm data |
78 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data_test data |
79 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.pkg . |
80 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.kpp . |
81 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.diagnostics . |
82 |
|
mitgcmuv >& output.txt |
83 |
|
|
84 |
|
|
85 |
|
there is comparison output in |
86 |
|
../../../../MITgcm_contrib/quarter_degree_global/results/output.txt |
87 |
|
|
88 |
|
|
89 |
|
############################################################################# |
90 |
# mpi test verification/global_with_exf including pkg/diagnostics on columbia |
# mpi test verification/global_with_exf including pkg/diagnostics on columbia |
91 |
|
|
92 |
cd MITgcm/verification/global_with_exf/build |
cd MITgcm/verification/global_with_exf/build |
93 |
\rm * |
\rm * |
94 |
\cp ../code/* . |
\cp ../code/* . |
95 |
|
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf . |
96 |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . |
97 |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . |
98 |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test . |
\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test . |
99 |
\mv SIZE.h_test SIZE.h |
\mv SIZE.h_test SIZE.h |
100 |
../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
101 |
make depend |
make depend |
102 |
make -j 4 |
make -j |
103 |
cd .. |
cd .. |
104 |
mkdir run |
mkdir run |
105 |
cd run |
cd run |
128 |
\cp ../../MITgcm_contrib/quarter_degree_global/code/* . |
\cp ../../MITgcm_contrib/quarter_degree_global/code/* . |
129 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
130 |
make depend |
make depend |
131 |
make -j 4 |
make -j |
132 |
cd ../exe |
cd ../exe |
133 |
\rm * |
\rm * |
134 |
\cp ../bin/mitgcmuv . |
\cp ../bin/mitgcmuv . |
153 |
\cp SIZE.h_8_480 SIZE.h |
\cp SIZE.h_8_480 SIZE.h |
154 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix |
../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix |
155 |
make depend |
make depend |
156 |
make -j 4 |
make -j |
157 |
cd ../exe |
cd ../exe |
158 |
\rm * |
\rm * |
159 |
\cp ../bin/mitgcmuv . |
\cp ../bin/mitgcmuv . |
183 |
\cp SIZE.h_8_960 SIZE.h |
\cp SIZE.h_8_960 SIZE.h |
184 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
185 |
make depend |
make depend |
186 |
make -j 4 |
make -j |
187 |
|
|
188 |
cd ../exe |
cd ../exe |
189 |
\cp ../bin/mitgcmuv . |
\cp ../bin/mitgcmuv . |
225 |
mv STDOUT.0000 output.test1440 tests/stdout1440 |
mv STDOUT.0000 output.test1440 tests/stdout1440 |
226 |
\rm STD* |
\rm STD* |
227 |
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
228 |
c17 480 runon 4-511 mitgcmuv1920 : \ |
c17 480 runon 14-511 mitgcmuv1920 : \ |
229 |
c18 480 runon 4-511 mitgcmuv1920 : \ |
c18 480 runon 14-511 mitgcmuv1920 : \ |
230 |
c19 480 runon 4-511 mitgcmuv1920 : \ |
c19 480 runon 14-511 mitgcmuv1920 : \ |
231 |
c20 480 runon 4-511 mitgcmuv1920 \ |
c20 480 runon 14-511 mitgcmuv1920 \ |
232 |
>&! output.test1920 |
>&! output.test1920 |
233 |
mv STDOUT.0000 output.test1920 tests/stdout1920 |
mv STDOUT.0000 output.test1920 tests/stdout1920 |
234 |
\rm STD* |
\rm STD* |
236 |
scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe |
scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe |
237 |
scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
238 |
scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe |
scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe |
239 |
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \ |
240 |
|
-d /nobackup/menemenl/eighth/MITgcm/exe \ |
241 |
c17 480 runon 9-511 mitgcmuv1920 : \ |
c17 480 runon 9-511 mitgcmuv1920 : \ |
242 |
c18 480 runon 9-511 mitgcmuv1920 : \ |
c18 480 runon 9-511 mitgcmuv1920 : \ |
243 |
c19 480 runon 9-511 mitgcmuv1920 : \ |
c19 480 runon 9-511 mitgcmuv1920 : \ |
263 |
scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe |
264 |
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ |
265 |
c17 480 runon 9-511 mitgcmuv1440 : \ |
c17 480 runon 9-511 mitgcmuv1440 : \ |
266 |
c19 480 runon 9-511 mitgcmuv1440 : \ |
c18 480 runon 9-511 mitgcmuv1440 : \ |
267 |
c20 480 runon 9-511 mitgcmuv1440 \ |
c19 480 runon 9-511 mitgcmuv1440 \ |
268 |
>&! output.run |
>&! output.run |
269 |
|
|
270 |
|
|
311 |
< viscA4GridMin=2e-3, |
< viscA4GridMin=2e-3, |
312 |
< viscA4GridMax=1e-2, |
< viscA4GridMax=1e-2, |
313 |
< viscC4Leith=0.2, |
< viscC4Leith=0.2, |
314 |
try: |
fails: |
315 |
< viscA4GridMin=4e-3, |
< viscA4GridMin=4e-3, |
316 |
< viscA4GridMax=8e-3, |
< viscA4GridMax=8e-3, |
317 |
< viscC4Leith=0.2, |
< viscC4Leith=0.2, |
318 |
|
fails: |
319 |
|
viscA4GridMin=5e-3, |
320 |
|
viscA4GridMax=1e-2, |
321 |
|
viscC4Leith=.2, |
322 |
|
starting with time step 50112, try: |
323 |
|
(this mean day 174 becomes day 116) |
324 |
|
viscA4GridMin=6.e-4, |
325 |
|
viscA4GridMax=8.e-3, |
326 |
|
viscC4Leith=0.1, |
327 |
|
deltat=200 |
328 |
|
|
329 |
|
|
330 |
%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
371 |
|
|
372 |
|
|
373 |
|
|
374 |
240-CPU 480-CPU 960-CPU 1440-CPU |
CPU 240 480 960 1440 1920 |
375 |
------------------------------------------------------- |
------------------------------------------------------------- |
376 |
MAIN LOOP 5066 2917 2227 1551 |
MAIN LOOP 5066 2917 2227 1551 1276 |
377 |
EXF_GETFORCING 38 33 126 60 |
EXF_GETFORCING 38 33 126 60 83 |
378 |
DO_OCEANIC_PHYS 1272 619 320 390 |
DO_OCEANIC_PHYS 1272 619 320 390 186 |
379 |
STATEKPP 532 265 138 181 |
STATEKPP 532 265 138 181 77 |
380 |
KPPMIX 374 188 98 112 |
KPPMIX 374 188 98 112 53 |
381 |
DYNAMICS 1429 718 313 319 |
DYNAMICS 1429 718 313 319 173 |
382 |
SOLVE_FOR_PRESSURE 206 119 483 169 |
SOLVE_FOR_PRESSURE 206 119 483 169 310 |
383 |
BLOCKING_EXCHANGES 115 70 53 29 |
BLOCKING_EXCHANGES 115 70 53 29 28 |
384 |
THERMODYNAMICS 1100 582 294 279 |
THERMODYNAMICS 1100 582 294 279 172 |
385 |
DO_THE_MODEL_IO 177 156 131 202 |
DO_THE_MODEL_IO 177 156 131 202 155 |
386 |
WRITE_CHECKPOINT 333 332 302 524 |
WRITE_CHECKPOINT 333 332 302 524 352 |
387 |
|
|
388 |
|
|
389 |
|
4 clusters |
390 |
|
Dec 16 08:17 Ttave.0000051840.data |
391 |
|
Dec 16 08:47 Ttave.0000053136.data |
392 |
|
Dec 16 09:17 Ttave.0000054432.data |
393 |
|
Dec 16 09:53 Ttave.0000055728.data |
394 |
|
Dec 17 14:08 Ttave.0000075168.data |
395 |
|
Dec 17 14:33 Ttave.0000076464.data |
396 |
|
Dec 17 14:58 Ttave.0000077760.data |
397 |
|
Dec 17 15:29 Ttave.0000079056.data |
398 |
|
|
399 |
|
1 cluster |
400 |
|
Dec 16 22:14 Ttave.0000059616.data |
401 |
|
Dec 16 23:16 Ttave.0000060912.data |
402 |
|
Dec 17 00:19 Ttave.0000062208.data |
403 |
|
Dec 17 01:27 Ttave.0000063504.data |
404 |
|
Dec 17 02:29 Ttave.0000064800.data |
405 |
|
Dec 17 03:31 Ttave.0000066096.data |
406 |
|
Dec 17 04:39 Ttave.0000067392.data |
407 |
|
Dec 17 05:42 Ttave.0000068688.data |
408 |
|
Dec 17 06:44 Ttave.0000069984.data |