--- MITgcm_contrib/quarter_degree_global/README.txt 2004/12/14 01:20:45 1.18 +++ MITgcm_contrib/quarter_degree_global/README.txt 2004/12/18 18:20:47 1.28 @@ -10,19 +10,53 @@ cvs co MITgcm/verification/testreport -########################################################################## -# mpi test of verification/global_with_exf on columbia +############################################################################# +# 1-CPU verification/global_with_exf including pkg/diagnostics cd MITgcm/verification/global_with_exf/build \rm * \cp ../code/* . +\cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf . +\cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . +\cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . +\cp ../../../../MITgcm_contrib/quarter_degree_global/code/DIAGNOSTICS_SIZE.h . +\cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test1 . +\mv SIZE.h_test1 SIZE.h +../../../tools/genmake2 +make depend +make -j +cd .. +mkdir run +cd run +\rm * +\cp ../build/mitgcmuv . +\ln -sf ../input/* . +\rm data +\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data_test data +\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.pkg . +\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.kpp . +\cp ../../../../MITgcm_contrib/quarter_degree_global/input/data.diagnostics . +mitgcmuv >& output.txt + + +there is comparison output in +../../../../MITgcm_contrib/quarter_degree_global/results/output.txt + + +############################################################################# +# mpi test verification/global_with_exf including pkg/diagnostics on columbia + +cd MITgcm/verification/global_with_exf/build +\rm * +\cp ../code/* . +\cp ../../../../MITgcm_contrib/quarter_degree_global/code/packages.conf . \cp ../../../../MITgcm_contrib/quarter_degree_global/code/ECCO_CPPOPTIONS.h . \cp ../../../../MITgcm_contrib/quarter_degree_global/code/CPP_OPTIONS.h . \cp ../../../../MITgcm_contrib/quarter_degree_global/code/SIZE.h_test . \mv SIZE.h_test SIZE.h -../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_efc+mpi_altix +../../../tools/genmake2 -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas make depend -make -j 4 +make -j cd .. mkdir run cd run @@ -39,7 +73,7 @@ ########################################################################## # 1440x1088 204-cpu (120x12)x(64x17) 1/4-deg integration on altix with efc -# requires input files in sudirectory iter69 to be at same level as MITgcm +# requires input files in subdirectory iter69 to be at same level as MITgcm # and MITgcm_contrib. A copy of iter69 resides on columbia10:/nobackup10 # The integration length is 4018 days, 1992-2002. # First three days need to be integrated using deltat=200. @@ -49,9 +83,9 @@ cd bin \rm * \cp ../../MITgcm_contrib/quarter_degree_global/code/* . -../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix +../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas make depend -make -j 4 +make -j cd ../exe \rm * \cp ../bin/mitgcmuv . @@ -76,7 +110,7 @@ \cp SIZE.h_8_480 SIZE.h ../tools/genmake2 -of ../tools/build_options/linux_ia64_efc+mpi_altix make depend -make -j 4 +make -j cd ../exe \rm * \cp ../bin/mitgcmuv . @@ -106,7 +140,7 @@ \cp SIZE.h_8_960 SIZE.h ../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas make depend -make -j 4 +make -j cd ../exe \cp ../bin/mitgcmuv . @@ -115,8 +149,8 @@ \cp data.exf_clim_8 data.exf_clim \cp data_SIO_8 data modpickup_8 -mpirun -v -a a2k c18 480 runon 4-483 mitgcmuv : c20 480 runon 4-483 mitgcmuv -mpirun -v -a a2k c18 508 runon 4-511 mitgcmuv : c20 508 runon 4-511 mitgcmuv +mpirun -v -a a2k c18 480 runon 11-490 mitgcmuv : c20 480 runon 11-490 mitgcmuv +mpirun -v -a a2k c18 508 runon 11-490 mitgcmuv : c20 508 runon 11-490 mitgcmuv on columbia18: ln -sf /nobackup18/menemenl/eighth /tmp/eighth @@ -132,7 +166,64 @@ \cp data_SIO_8 data \ln -sf /tmp/eighth/MITgcm/exe/pick* . -mpirun -v -a a2k -d /tmp/eighth/MITgcm/exe c18 480 runon 4-511 mitgcmuv960 : c20 480 runon 4-511 mitgcmuv960 >&! output.txt & +mpirun -v -a a2k -d /tmp/eighth/MITgcm/exe c18 480 runon 11-490 mitgcmuv960 : \ + c20 480 runon 11-490 mitgcmuv960 >&! output.txt & + +\cp data.test data +scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe +scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe +scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe +mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ + c18 480 runon 11-490 mitgcmuv1440 : \ + c19 480 runon 11-490 mitgcmuv1440 : \ + c20 480 runon 11-490 mitgcmuv1440 \ + >&! output.test1440 +mkdir tests +mv STDOUT.0000 output.test1440 tests/stdout1440 +\rm STD* +mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ + c17 480 runon 11-490 mitgcmuv1920 : \ + c18 480 runon 11-490 mitgcmuv1920 : \ + c19 480 runon 11-490 mitgcmuv1920 : \ + c20 480 runon 11-490 mitgcmuv1920 \ + >&! output.test1920 +mv STDOUT.0000 output.test1920 tests/stdout1920 +\rm STD* +\cp data.run data +scp data:columbia17:/nobackup/menemenl/eighth/MITgcm/exe +scp data:columbia19:/nobackup/menemenl/eighth/MITgcm/exe +scp data:columbia20:/nobackup/menemenl/eighth/MITgcm/exe +/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \ + -d /nobackup/menemenl/eighth/MITgcm/exe \ + c17 480 runon 11-490 mitgcmuv1920 : \ + c18 480 runon 11-490 mitgcmuv1920 : \ + c19 480 runon 11-490 mitgcmuv1920 : \ + c20 480 runon 11-490 mitgcmuv1920 \ + >&! output.run & + + + + +\cp data.test data +scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe +scp data columbia20:/nobackup/menemenl/eighth/MITgcm/exe +mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ + c18 480 runon 9-511 mitgcmuv1440 : \ + c19 480 runon 9-511 mitgcmuv1440 : \ + c20 480 runon 9-511 mitgcmuv1440 \ + >&! output.test1440 +mkdir tests +mv STDOUT.0000 output.test1440 tests/stdout1440 +\rm STD* +\cp data.run data +scp data columbia17:/nobackup/menemenl/eighth/MITgcm/exe +scp data columbia19:/nobackup/menemenl/eighth/MITgcm/exe +mpirun -v -a a2k -d /nobackup/menemenl/eighth/MITgcm/exe \ + c17 480 runon 9-511 mitgcmuv1440 : \ + c18 480 runon 9-511 mitgcmuv1440 : \ + c19 480 runon 9-511 mitgcmuv1440 \ + >&! output.run + @@ -145,10 +236,52 @@ < viscA4GridMin=6.e-4, < viscA4GridMax=8.e-3, < viscC4Leith=0.1, -starting at ????? try +fails: < viscA4GridMin=6.e-4, < viscA4GridMax=8.e-3, < viscC4Leith=0.2, +fails: +< viscA4GridMin=1.e-3, +< viscA4GridMax=1.e-2, +< viscC4Leith=0.2, +fails: +< viscA4GridMin=1.e-3, +< viscA4GridMax=1.e-2, +< viscC4Leith=0.3, +fails: +< viscA4GridMin=1.2e-3, +< viscA4GridMax=1.6e-2, +< viscC4Leith=0.2, +fails: +< viscA4GridMin=1.2e-3, +< viscA4GridMax=1.6e-2, +< viscC4Leith=0.4, +fails +< viscA4GridMin=1.2e-3, +< viscA4GridMax=1.2e-2, +< viscC4Leith=1.2, +fails: +< viscA4GridMin=2e-3, +< viscA4GridMax=1e-2, +< viscC4Leith=0.1, +fails: +< viscA4GridMin=2e-3, +< viscA4GridMax=1e-2, +< viscC4Leith=0.2, +fails: +< viscA4GridMin=4e-3, +< viscA4GridMax=8e-3, +< viscC4Leith=0.2, +fails: + viscA4GridMin=5e-3, + viscA4GridMax=1e-2, + viscC4Leith=.2, +starting with time step 50112, try: +(this mean day 174 becomes day 116) + viscA4GridMin=6.e-4, + viscA4GridMax=8.e-3, + viscC4Leith=0.1, + deltat=200 %%%%%%%%%%%%%%%%%%%%%%%%%%%%% @@ -177,31 +310,115 @@ scsl.1.5.0.0 c18 intel-comp.8.0.070 480-CPU default mpt.1.11-85 ------------------------------------------------- -MAIN LOOP 4024 2917 -EXF_GETFORCING 218 33 -DO_OCEANIC_PHYS 622 619 -STATEKPP 269 265 -KPPMIX 190 188 -DYNAMICS 747 718 -SOLVE_FOR_PRESSURE 966 119 -BLOCKING_EXCHANGES 64 70 -THERMODYNAMICS 553 582 -DO_THE_MODEL_IO 178 156 -WRITE_CHECKPOINT 364 332 - - - - 240-CPU 480-CPU 960-CPU ------------------------------------------------- -MAIN LOOP 5066 2917 2227 -EXF_GETFORCING 38 33 126 -DO_OCEANIC_PHYS 1272 619 320 -STATEKPP 532 265 138 -KPPMIX 374 188 98 -DYNAMICS 1429 718 313 -SOLVE_FOR_PRESSURE 206 119 483 -BLOCKING_EXCHANGES 115 70 53 -THERMODYNAMICS 1100 582 294 -DO_THE_MODEL_IO 177 156 131 -WRITE_CHECKPOINT 333 332 302 + c19 default + c17 default, other processes + c19 new +------------------------------------------------------------------------- +MAIN LOOP 4024 2917 5379 8895 3571 +EXF_GETFORCING 218 33 880 261 227 +DO_OCEANIC_PHYS 622 619 621 913 620 +STATEKPP 269 265 268 310 265 +KPPMIX 190 188 189 291 189 +DYNAMICS 747 718 745 1456 714 +SOLVE_FOR_PRESSURE 966 119 1703 2748 900 +BLOCKING_EXCHANGES 64 70 392 375 70 +THERMODYNAMICS 553 582 566 1510 584 +DO_THE_MODEL_IO 178 156 149 184 152 +WRITE_CHECKPOINT 364 332 864 420 333 + + + +CPU 240 480 960 1440 1920 +------------------------------------------------------------- +MAIN LOOP 5066 2917 2227 1551 1276 +EXF_GETFORCING 38 33 126 60 83 +DO_OCEANIC_PHYS 1272 619 320 390 186 +STATEKPP 532 265 138 181 77 +KPPMIX 374 188 98 112 53 +DYNAMICS 1429 718 313 319 173 +SOLVE_FOR_PRESSURE 206 119 483 169 310 +BLOCKING_EXCHANGES 115 70 53 29 28 +THERMODYNAMICS 1100 582 294 279 172 +DO_THE_MODEL_IO 177 156 131 202 155 +WRITE_CHECKPOINT 333 332 302 524 352 + + +4 clusters timeave +Dec 16 08:17 Ttave.0000051840.data +Dec 16 08:47 Ttave.0000053136.data +Dec 16 09:17 Ttave.0000054432.data +Dec 16 09:53 Ttave.0000055728.data +Dec 17 14:08 Ttave.0000075168.data +Dec 17 14:33 Ttave.0000076464.data +Dec 17 14:58 Ttave.0000077760.data +Dec 17 15:29 Ttave.0000079056.data + +1 cluster timeave +Dec 16 22:14 Ttave.0000059616.data +Dec 16 23:16 Ttave.0000060912.data +Dec 17 00:19 Ttave.0000062208.data +Dec 17 01:27 Ttave.0000063504.data +Dec 17 02:29 Ttave.0000064800.data +Dec 17 03:31 Ttave.0000066096.data +Dec 17 04:39 Ttave.0000067392.data +Dec 17 05:42 Ttave.0000068688.data +Dec 17 06:44 Ttave.0000069984.data + +2 cluster timeave +Dec 17 21:19 Ttave.0000086832.data +Dec 17 21:55 Ttave.0000088128.data 36 +Dec 17 22:30 Ttave.0000089424.data 35 +Dec 17 23:12 Ttave.0000090720.data 42 +Dec 17 23:47 Ttave.0000092016.data 35 +Dec 18 00:23 Ttave.0000093312.data 36 +Dec 18 01:04 Ttave.0000094608.data 41 +Dec 18 01:39 Ttave.0000095904.data 35 + +2 cluster diagnostics +Dec 18 02:26 THETA.0000086832.data +Dec 18 03:05 THETA.0000088128.data 39 +Dec 18 03:43 THETA.0000089424.data 38 +Dec 18 04:27 THETA.0000090720.data 44 +Dec 18 05:06 THETA.0000092016.data 39 +Dec 18 05:45 THETA.0000093312.data 39 +Dec 18 06:29 THETA.0000094608.data 44 +Dec 18 07:08 THETA.0000095904.data 39 + + +%%%%%%%%%%%%%%%%% + + + +e1=readbin('test_oldstyle/ETAtave.0000000018.data',[90 40]); +e2=readbin('ETAN.0000000018.data',[90 40]); +e16=readbin('test_oldstyle/Eta.0000000016.data',[90 40]); +e17=readbin('test_oldstyle/Eta.0000000017.data',[90 40]); +e18=readbin('test_oldstyle/Eta.0000000018.data',[90 40]); +minmax(e1-e2) +minmax(e2-(e16+e17+e18)/3) + +e1=readbin('test_oldstyle/sFluxtave.0000000018.data',[90 40]); +e2=readbin('SFLUX.0000000018.data',[90 40]); +minmax(e1-e2) + +e1=readbin('test_oldstyle/tFluxtave.0000000018.data',[90 40]); +e2=readbin('TFLUX.0000000018.data',[90 40]); +minmax(e1-e2) + +e1=readbin('TRELAX.0000000018.data',[90 40]); +subplot(211),mypcolor(e1');colorbar + +e1=readbin('SRELAX.0000000018.data',[90 40]); +subplot(211),mypcolor(e1');colorbar + +e1=readbin('TICE.0000000018.data',[90 40]); +subplot(211),mypcolor(e1');colorbar + + +e1=readbin('test_oldstyle/wVeltave.0000000018.data',[90 40 15]); +e2=readbin('WVEL.0000000018.data',[90 40 15]); +e16=readbin('test_oldstyle/W.0000000016.data',[90 40 15]); +e17=readbin('test_oldstyle/W.0000000017.data',[90 40 15]); +e18=readbin('test_oldstyle/W.0000000018.data',[90 40 15]); +minmax(e1-e2) +minmax(e2-(e16+e17+e18)/3)