Instructions for setting up a 1/8-deg integration with
bulk formulae and sea-ice, starting from 2000 spin-up.

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# getting the code from anonymous CVS server

cvs co MITgcm_contrib/quarter_degree_global
cvs co MITgcm_code

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# 2880x2176 480-cpu (96x30)x(136x16) 1/8-deg integration on altix.
# Requires input files in sudirectory iter69 to be at same level as MITgcm
# and MITgcm_contrib.  A copy of iter69 with 1/8-deg files resides on
# columbia18:/nobackup18/menemenl/eight.

module purge
module load modules scsl.1.5.0.0 intel-comp.8.0.070 mpt.1.11-85
setenv MPI_DSM_DISTRIBUTE
cd MITgcm
mkdir bin exe
cd bin
\rm *
\cp ../../MITgcm_contrib/quarter_degree_global/code/* .
\cp SIZE.h_8_480 SIZE.h
\cp packages.conf_bulk packages.conf
\cp ECCO_CPPOPTIONS.h_bulk ECCO_CPPOPTIONS.h
\cp CPP_OPTIONS.h_bulk CPP_OPTIONS.h
\cp DIAGNOSTICS_SIZE.h_bulk DIAGNOSTICS_SIZE.h
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_nas
make depend
make -j
\cp mitgcmuv ../exe/mitgcmuv480
cd ../exe
\cp ../../MITgcm_contrib/quarter_degree_global/input/* .
\cp data_bulk_8 data
\cp data.pkg_bulk data.pkg
\cp data.exf_clim_bulk data.exf_clim
\cp data.exf_bulk data.exf
\cp data.diagnostics_bulk data.diagnostics
ln -sf /nobackup/menemenl/cube/run_template/LEV01_SSS_360x180x12.bin .
ln -sf ../../iter69/bathymetry2880x2176.bin .
ln -sf ../../iter69/pickup_seaice.1jan00 pickup_seaice.0001262304
ln -sf ../../iter69/pickup.ncep.1jan00 pickup.0001262304
./modpickup_8
/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \
                 c20 480 runon 11-511 mitgcmuv480 \
                 < /dev/null >&! output.run &

/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \
                 -d /nobackup/menemenl/eighth/MITgcm/exe \
                 c20 470 runon 4-479 mitgcmuv1920 : \
                 c17 505 runon 4-479 mitgcmuv1920 : \
                 c18 440 runon 4-446 mitgcmuv1920 : \
                 c19 505 runon 4-511 mitgcmuv1920   \
                 < /dev/null >&! output.run &

/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \
                 -d /nobackup/menemenl/eighth/MITgcm/exe \
                 c20 500 runon 4-511 mitgcmuv1440 : \
                 c18 440 runon 4-446 mitgcmuv1440 : \
                 c19 500 runon 4-511 mitgcmuv1440   \
                 < /dev/null >&! output.run &

/opt/sgi/mpt/1.11-85/bin/mpirun.real -v -a a2k \
                 -d /nobackup/menemenl/eighth/MITgcm/exe \
                 c20 242 runon 4-479 mitgcmuv1632 : \
                 c17 460 runon 4-479 mitgcmuv1632 : \
                 c18 430 runon 4-446 mitgcmuv1632 : \
                 c19 500 runon 4-511 mitgcmuv1632   \
                 < /dev/null >&! output.run &