Annotation of /MITgcm_contrib/test_scripts/other/linux_amd64_ifort+mpi_chk

#!/bin/bash
#
#  $Header: /u/gcmpack/MITgcm_contrib/test_scripts/other/linux_amd64_ifort+mpi_chk,v 1.3 2011/06/03 17:59:32 jmc Exp $
#  $Name:  $
#
# Adapted from linux_amd64_ifort11+mpi_generic
#  with specific local path (=MPI_INC_DIR) for MPI
# Tested on jmc's laptop with MPI & Multi-Threaded
#  using intel compiler v.11.1.046 & mpich-1.2.7 (FC.11)
#                       v.12.0.4   & mpich-1.2.7 (FC.14)
#  (intel compiler & mpich installed in /opt/intel/ )

#  Build options for the intel 11 fortran compiler with a generic MPI
# DON'T FORGET to set environment variable MPI_INC_DIR to the include
# directory of your MPI implementation

#-------
# run with OpenMP: needs to set environment var. OMP_NUM_THREADS
#    and generally, needs to increase the stack-size:
#   -  sh,bash:
#     > export OMP_NUM_THREADS=2
#     > export KMP_STACKSIZE=400m
#   - csh,tcsh:
#     > setenv OMP_NUM_THREADS 2
#     > setenv KMP_STACKSIZE 400m
#  NOTE: need to set KMP_STACKSIZE in ~/.tcshrc
#        (but curiously, works without OMP_NUM_THREADS in ~/.tcshrc).
#-------

MPI_INC_DIR='/opt/intel/mpich-1.2.7p1/include'

FC=${FC:=mpif77}
F90C=${F90C:=mpif90}
CC=${CC:=mpicc}
LINK="$F90C -shared-intel -no-ipo"
# -shared-intel replaces -i-dynamic ; -static-intel replaces -i-static
#LINK="$F90C -static-intel -no-ipo"
F90C='mpif90 -fixed'

DEFINES='-DALLOW_USE_MPI -DALWAYS_USE_MPI -DWORDLENGTH=4'
CPP='cpp  -traditional -P'
F90FIXEDFORMAT='-fixed -Tf'
EXTENDED_SRC_FLAG='-132'
GET_FC_VERSION="--version"
OMPFLAG='-openmp'

NOOPTFLAGS='-O0 -g'
NOOPTFILES=''

INCLUDEDIRS=''
INCLUDES=''
LIBS=''

if test "x$DEVEL" != x ; then
    FFLAGS="$FFLAGS -m64 -fPIC -convert big_endian -assume byterecl -O0 -g -debug all -debug-parameters all -noalign -fp-stack-check -check all -fpe0 -traceback -ftrapuv -fp-model strict -warn all"
else
    FFLAGS="$FFLAGS -m64 -fPIC -convert big_endian -assume byterecl"
fi
#- might want to use '-r8' for fizhi pkg:
#FFLAGS="$FFLAGS -r8"

if test "x$GENERIC" != x ; then
    PROCF=-axSSE4.2,SSE4.1,SSSE3,SSE3,SSE2
else
    PROCF=-xHost
fi
if test "x$IEEE" = x ; then
    FOPTIM="-O2 -align -ip -opt-streaming-stores auto $PROCF"
else
#-  for automatic testing with testreport (but no relation with IEEE arithmetic):
    FOPTIM="-fpe0 -ftz -fp-stack-check -check all -ftrapuv"
    FOPTIM="$FOPTIM -O0 -noalign -g -traceback $PROCF"
    FFLAGS="$FFLAGS -warn all -warn nounused"
    if test "x$DEVEL" != x ; then
	FOPTIM="$PROCF"
    fi
fi
F90FLAGS=$FFLAGS
F90OPTIM=$FOPTIM
CFLAGS="-O0 -ip -m64 -fPIC $PROCF"

if [ "x$NETCDF_ROOT" != x ] ; then
    INCLUDEDIRS="${NETCDF_ROOT}/include"
    INCLUDES="-I${NETCDF_ROOT}/include"
    LIBS="-L${NETCDF_ROOT}/lib64 -L${NETCDF_ROOT}/lib"
elif [ "x$NETCDF_HOME" != x ]; then
    INCLUDEDIRS="${NETCDF_HOME}/include"
    INCLUDES="-I${NETCDF_HOME}/include"
    LIBS="-L${NETCDF_ROOT}/lib64 -L${NETCDF_HOME}/lib"
elif [ "x$NETCDF_INC" != x -a "x$NETCDF_LIB" != x ]; then
    NETCDF_INC=`echo $NETCDF_INC | sed 's/-I//g'`
    NETCDF_LIB=`echo $NETCDF_LIB | sed 's/-L//g'`
    INCLUDEDIRS="${NETCDF_INC}"
    INCLUDES="-I${NETCDF_INC}"
    LIBS="-L${NETCDF_LIB}"
elif [ "x$NETCDF_INCDIR" != x -a "x$NETCDF_LIBDIR" != x ]; then
    INCLUDEDIRS="${NETCDF_INCDIR}"
    INCLUDES="-I${NETCDF_INCDIR}"
    LIBS="-L${NETCDF_LIBDIR}"
elif test -d /usr/include/netcdf-3 ; then
    INCLUDEDIRS='/usr/include/netcdf-3'
    INCLUDES='-I/usr/include/netcdf-3'
    LIBS='-L/usr/lib64/netcdf-3 -L/usr/lib/netcdf-3'
elif test -d /usr/local/pkg/netcdf ; then
    INCLUDEDIRS='/usr/local/pkg/netcdf/include'
    INCLUDES='-I/usr/local/pkg/netcdf/include'
    LIBS='-L/usr/local/pkg-x86_64/netcdf/lib64 -L/usr/local/pkg-x86_64/netcdf/lib -L/usr/local/pkg/netcdf/lib64 -L/usr/local/pkg/netcdf/lib'
elif test -d /usr/include/netcdf ; then
    INCLUDEDIRS='/usr/include/netcdf'
    INCLUDES='-I/usr/include/netcdf'
elif test -d /usr/local/netcdf ; then
    INCLUDEDIRS='/usr/include/netcdf/include'
    INCLUDES='-I/usr/local/netcdf/include'
    LIBS='-L/usr/local/netcdf/lib64 -L/usr/local/netcdf/lib'
elif test -f /usr/local/include/netcdf.inc ; then
    INCLUDEDIRS='/usr/local/include'
    INCLUDES='-I/usr/local/include'
    LIBS='-L/usr/local/lib64 -L/usr/local/lib'
fi

INCLUDES="$INCLUDES -I$MPI_INC_DIR"
INCLUDEDIRS="$INCLUDEDIRS $MPI_INC_DIR"
MPIINCLUDEDIR="$MPI_INC_DIR"
MPI_HEADER_FILES='mpif.h mpiof.h'
MPI_HEADER_FILES_INC='./mpi_headers/mpif.h ./mpi_headers/mpiof.h'
1	jmc	1.1	#!/bin/bash
2			#
3	jmc	1.4	# $Header: /u/gcmpack/MITgcm_contrib/test_scripts/other/linux_amd64_ifort+mpi_chk,v 1.3 2011/06/03 17:59:32 jmc Exp $
4	jmc	1.1	# $Name: $
5	jmc	1.3	#
6			# Adapted from linux_amd64_ifort11+mpi_generic
7			# with specific local path (=MPI_INC_DIR) for MPI
8			# Tested on jmc's laptop with MPI & Multi-Threaded
9			# using intel compiler v.11.1.046 & mpich-1.2.7 (FC.11)
10			# v.12.0.4 & mpich-1.2.7 (FC.14)
11			# (intel compiler & mpich installed in /opt/intel/ )
12	jmc	1.1
13	jmc	1.3	# Build options for the intel 11 fortran compiler with a generic MPI
14			# DON'T FORGET to set environment variable MPI_INC_DIR to the include
15			# directory of your MPI implementation
16	jmc	1.1
17			#-------
18			# run with OpenMP: needs to set environment var. OMP_NUM_THREADS
19			# and generally, needs to increase the stack-size:
20			# - sh,bash:
21			# > export OMP_NUM_THREADS=2
22			# > export KMP_STACKSIZE=400m
23			# - csh,tcsh:
24			# > setenv OMP_NUM_THREADS 2
25			# > setenv KMP_STACKSIZE 400m
26	jmc	1.3	# NOTE: need to set KMP_STACKSIZE in ~/.tcshrc
27			# (but curiously, works without OMP_NUM_THREADS in ~/.tcshrc).
28	jmc	1.1	#-------
29
30	jmc	1.3	MPI_INC_DIR='/opt/intel/mpich-1.2.7p1/include'
31	jmc	1.1
32	jmc	1.3	FC=${FC:=mpif77}
33			F90C=${F90C:=mpif90}
34			CC=${CC:=mpicc}
35			LINK="$F90C -shared-intel -no-ipo"
36			# -shared-intel replaces -i-dynamic ; -static-intel replaces -i-static
37			#LINK="$F90C -static-intel -no-ipo"
38	jmc	1.1	F90C='mpif90 -fixed'
39
40			DEFINES='-DALLOW_USE_MPI -DALWAYS_USE_MPI -DWORDLENGTH=4'
41			CPP='cpp -traditional -P'
42			F90FIXEDFORMAT='-fixed -Tf'
43			EXTENDED_SRC_FLAG='-132'
44	jmc	1.2	GET_FC_VERSION="--version"
45	jmc	1.1	OMPFLAG='-openmp'
46
47	jmc	1.3	NOOPTFLAGS='-O0 -g'
48	jmc	1.1	NOOPTFILES=''
49
50			INCLUDEDIRS=''
51			INCLUDES=''
52			LIBS=''
53
54			if test "x$DEVEL" != x ; then
55	jmc	1.3	FFLAGS="$FFLAGS -m64 -fPIC -convert big_endian -assume byterecl -O0 -g -debug all -debug-parameters all -noalign -fp-stack-check -check all -fpe0 -traceback -ftrapuv -fp-model strict -warn all"
56	jmc	1.1	else
57	jmc	1.3	FFLAGS="$FFLAGS -m64 -fPIC -convert big_endian -assume byterecl"
58	jmc	1.1	fi
59			#- might want to use '-r8' for fizhi pkg:
60			#FFLAGS="$FFLAGS -r8"
61
62	jmc	1.3	if test "x$GENERIC" != x ; then
63			PROCF=-axSSE4.2,SSE4.1,SSSE3,SSE3,SSE2
64			else
65			PROCF=-xHost
66			fi
67	jmc	1.1	if test "x$IEEE" = x ; then
68	jmc	1.3	FOPTIM="-O2 -align -ip -opt-streaming-stores auto $PROCF"
69	jmc	1.1	else
70	jmc	1.3	#- for automatic testing with testreport (but no relation with IEEE arithmetic):
71			FOPTIM="-fpe0 -ftz -fp-stack-check -check all -ftrapuv"
72			FOPTIM="$FOPTIM -O0 -noalign -g -traceback $PROCF"
73	jmc	1.1	FFLAGS="$FFLAGS -warn all -warn nounused"
74	jmc	1.3	if test "x$DEVEL" != x ; then
75			FOPTIM="$PROCF"
76			fi
77	jmc	1.1	fi
78			F90FLAGS=$FFLAGS
79			F90OPTIM=$FOPTIM
80	jmc	1.3	CFLAGS="-O0 -ip -m64 -fPIC $PROCF"
81	jmc	1.1
82			if [ "x$NETCDF_ROOT" != x ] ; then
83			INCLUDEDIRS="${NETCDF_ROOT}/include"
84			INCLUDES="-I${NETCDF_ROOT}/include"
85	jmc	1.3	LIBS="-L${NETCDF_ROOT}/lib64 -L${NETCDF_ROOT}/lib"
86	jmc	1.1	elif [ "x$NETCDF_HOME" != x ]; then
87			INCLUDEDIRS="${NETCDF_HOME}/include"
88			INCLUDES="-I${NETCDF_HOME}/include"
89	jmc	1.3	LIBS="-L${NETCDF_ROOT}/lib64 -L${NETCDF_HOME}/lib"
90	jmc	1.1	elif [ "x$NETCDF_INC" != x -a "x$NETCDF_LIB" != x ]; then
91			NETCDF_INC=`echo $NETCDF_INC \| sed 's/-I//g'`
92			NETCDF_LIB=`echo $NETCDF_LIB \| sed 's/-L//g'`
93			INCLUDEDIRS="${NETCDF_INC}"
94			INCLUDES="-I${NETCDF_INC}"
95			LIBS="-L${NETCDF_LIB}"
96			elif [ "x$NETCDF_INCDIR" != x -a "x$NETCDF_LIBDIR" != x ]; then
97			INCLUDEDIRS="${NETCDF_INCDIR}"
98			INCLUDES="-I${NETCDF_INCDIR}"
99			LIBS="-L${NETCDF_LIBDIR}"
100			elif test -d /usr/include/netcdf-3 ; then
101			INCLUDEDIRS='/usr/include/netcdf-3'
102			INCLUDES='-I/usr/include/netcdf-3'
103	jmc	1.3	LIBS='-L/usr/lib64/netcdf-3 -L/usr/lib/netcdf-3'
104			elif test -d /usr/local/pkg/netcdf ; then
105			INCLUDEDIRS='/usr/local/pkg/netcdf/include'
106			INCLUDES='-I/usr/local/pkg/netcdf/include'
107			LIBS='-L/usr/local/pkg-x86_64/netcdf/lib64 -L/usr/local/pkg-x86_64/netcdf/lib -L/usr/local/pkg/netcdf/lib64 -L/usr/local/pkg/netcdf/lib'
108	jmc	1.1	elif test -d /usr/include/netcdf ; then
109			INCLUDEDIRS='/usr/include/netcdf'
110			INCLUDES='-I/usr/include/netcdf'
111			elif test -d /usr/local/netcdf ; then
112			INCLUDEDIRS='/usr/include/netcdf/include'
113			INCLUDES='-I/usr/local/netcdf/include'
114	jmc	1.3	LIBS='-L/usr/local/netcdf/lib64 -L/usr/local/netcdf/lib'
115			elif test -f /usr/local/include/netcdf.inc ; then
116	jmc	1.1	INCLUDEDIRS='/usr/local/include'
117			INCLUDES='-I/usr/local/include'
118	jmc	1.3	LIBS='-L/usr/local/lib64 -L/usr/local/lib'
119	jmc	1.1	fi
120
121			INCLUDES="$INCLUDES -I$MPI_INC_DIR"
122			INCLUDEDIRS="$INCLUDEDIRS $MPI_INC_DIR"
123			MPIINCLUDEDIR="$MPI_INC_DIR"
124			MPI_HEADER_FILES='mpif.h mpiof.h'
125			MPI_HEADER_FILES_INC='./mpi_headers/mpif.h ./mpi_headers/mpiof.h'