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1                <ul>  <ul><li>
2                  <li>N. Ayoub, 2006: Estimation of boundary  values in a North Atlantic circulation model  using an adjoint model. Ocean Modelling, 12(3-4), pp. 319-347. <a href="http://dx.doi.org/10.1016/j.ocemod.2005.06.003" target="_blank">doi:10.1016/j.ocemod.2005.06.003</a>. </li>  N. Ayoub, 2006:
3                  </ul>  <a href="http://dx.doi.org/10.1016/j.ocemod.2005.06.003" target="_blank">
4                <ul>  Estimation of boundary values in a North Atlantic
5                  <li> S. Dutkiewicz, M.J. Follows, P. Heimbach  and J. Marshall, 2006: Controls on ocean productivity and air-sea carbon  flux: An adjoint model sensitivity study. Geophys. Res. Lett., 33,  L02603, <a href="http://dx.doi.org/10.1029/2005GL024987" target="_blank">doi:10.1029/2005GL024987</a></li>  circulation model using an adjoint model.</a> Ocean Modelling, 12,
6                  </ul>  319-347.
7                <ul>  </li></ul>
8                  <li>D. Ellsworth, B. Green, C. Henze, P. Moran, and T. Sandstrom, 2006: Concurrent Visualization in a Production Supercomputing Environment. IEEE Trans. Visualization and Computer Graphics, 12, pp. 997-1004.</li>  
9                  </ul>  <ul><li>
10                <ul>  V. Bugnion, C. Hill, and P. Stone, 2006: An adjoint analysis of the meridional
11                  <li> G. Gebbie, P. Heimbach and C. Wunsch,  2006: Strategies for nested and eddy-resolving state estimation. J. Geophys.  Res., 111, C10073, <a href="http://dx.doi.org/10.1029/2005JC003094" target="_blank">doi:10.1029/2005JC003094</a>. </li>  overturning circulation in an ocean model. J. Climate, 19, 3732-3750.
12                  </ul>  </li></ul>
13                <ul>  
14                  <li>P. Heimbach, R.M. Ponte, C. Evangelinos,  G. Forget, M. Mazloff, D. Menemenlis, S. Vinogradov and C. Wunsch, 2006: <a href="http://earth.esa.int/workshops/venice06/participants/333/paper_333_wunsch.pdf" target="_blank">Combining  Altimetric and All Other Data with a General Circulation Model.</a> in:  Proceedings of the <a href="http://earth.esa.int/cgi-bin/confalt15y.pl?abstract=333" target="_blank">15 Years of  Progress in Radar Altimetry Symposium</a>, Venice, 13-18 March 2006, ESA  Special Publication SP-614, ISBN 92-9092-925-1. ESA Publications Division, ESTEC,  2200 AG Noordwijk, The Netherlands. </li>  <ul><li>
15                  </ul>  S. Dutkiewicz, M.J. Follows, P. Heimbach and J. Marshall, 2006:
16                <ul>  <a href="http://dx.doi.org/10.1029/2005GL024987" target="_blank">
17                  <li>R. Kwok, G. Cunningham, H. Zwally, and D. Yi, 2006: ICESat over Arctic sea ice: Interpretation of altimetric and reflectivity profiles. J. Geophys. Res., 111, <a href="http://dx.doi.org/10.1029/2005JC003175" target="_blank">doi:10.1029/2005JC003175</a>.</li>  Controls on ocean productivity and air-sea carbon flux: An adjoint
18                  </ul>  model sensitivity study.</a> Geophys. Res. Lett., 33, L02603.
19                <ul>  </li></ul>
20                  <li>U.  Naumann, J. Utke, P. Heimbach, C. Hill, D. Ozyurt, C. Wunsch, M. Fagan, N.  Tallent and M. Strout, 2006: <a href="http://sunsite.informatik.rwth-aachen.de/Publications/AIB/2006/2006-05.pdf" target="_blank">Adjoint code by source transformation with  OpenAD/F.</a> In: European Conference on Computational Fluid Dynamics ECCOMAS  CFD 2006 Eds: P. Wesseling, E. Onate and J. Periaux. Delft,  The Netherlands. </li>  
21                  </ul>  <ul><li>
22                <ul>  D. Ellsworth, B. Green, C. Henze, P. Moran, and T. Sandstrom, 2006:
23                  <li> R.M. Ponte, 2006: Oceanic response to  surface loading effects neglected in volume-conserving models. J. Phys.  Oceanogr., 36, pp. 426--434, <a href="http://dx.doi.org/10.1175/JPO2843.1" target="_blank">doi:10.1175/JPO2843.1</a> </li>  Concurrent Visualization in a Production Supercomputing
24                  </ul>  Environment. IEEE Trans. Visualization and Computer Graphics, 12,
25                <ul>  997-1004.
26                  <li>Stammer, D., C. Wunsch and K. Ueyoshi,  2006: Temporal Changes in Ocean Eddy Transports. J. Phys. Oceanogr.,  36(3), pp. 543-550, <a href="http://dx.doi.org/10.1175/JPO2858.1" target="_blank">doi:10.1175/JPO2858.1</a>. </li>  </li></ul>
27                  </ul>  
28                <ul>  <ul><li>
29                  <li>J. Utke, U. Naumann, M. Fagan, N.  Thallent, M. Strout, P. Heimbach, C. Hill and C. Wunsch, 2006: OpenAD/F: A  modular, open-source tool for automatic differentiation of Fortran codes. ACM  Transactions on Mathematical Software (TOMS) (in press).</li>  D. Ferreira and J. Marshall, 2006: <a
30                  </ul>  href="http://paoc.mit.edu/paoc/papers/Residual_to_sub.pdf">
31                <ul>  Formulation and implementation of a residual-mean ocean circulation
32                  <li> C. Wunsch, 2006: Discrete Inverse and  State Estimation Problems: With Geophysical Fluid Applications. 384p. Cambridge  University Press, 2006. </li>  model.</a> Ocean Modelling, 13, 86-107.
33                  </ul>  </li></ul>
34                <ul>  
35                  <li>C. Wunsch, 2006: <a href="http://ocean.mit.edu/~cwunsch/papersonline/towardswoce.pdf" target="_blank">Towards the  World Ocean Circulation Experiment and a Bit of Aftermath.</a> in: Physical  Oceanography: Developments since 1950. M. Jochum and R. Murtugudde (Eds.),  Springer-Verlag, 2006. </li>  <ul><li>
36                  </ul>  S. Fletcher, N. Gruber, A. Jacobson, S. Doney, S. Dutkiewicz,
37                <ul>  M. Gerber, M. Follows, F. Joos, K. Lindsay, D. Menemenlis, A. Mouchet,
38                  <li>C. Wunsch, 2006: <a href="http://earth.esa.int/workshops/venice06/participants/332/paper_332_wunsch.pdf" target="_blank">Altimetry:  Past, Present, and Future</a> in: Proceedings of the <a href="http://earth.esa.int/cgi-bin/confalt15y.pl?abstract=333" target="_blank">15 Years of  Progress in Radar Altimetry Symposium</a>, Venice, 13-18 March 2006, ESA  Special Publication SP-614, ISBN 92-9092-925-1. ESA Publications Division,  ESTEC, 2200 AG Noordwijk, The Netherlands. </li>  S. Muller, and J. Sarmiento, 2006: <a
39                  </ul>  href="http://ecco2.org/manuscripts/2006/MikaloffGCB06.pdf"> Inverse
40                <ul>  estimates of anthropogenic CO2 uptake, transport, and storage by the
41                  <li>C. Wunsch and P. Heimbach, 2006:  Decadal Changes in the North Atlantic Meridional Overturning and Heat Flux. J.  Phys. Oceanogr., 36(11), pp. 2012--2024, <a href="http://dx.doi.org/10.1175/JPO2957.1" target="_blank">doi:10.1175/JPO2957.1</a>. </li>  ocean.</a> Global Biogeochem. Cycles, 20, GB2002.
42                  </ul>  </li></ul>
43    
44    <ul><li>
45    L. Fu, 2006:
46    <a href="http://dx.doi.org/10.1029/2006GL026245" target="_blank">
47    Pathways of eddies in the South Atlantic revealed from
48    satellite altimeter observations.</a>
49    Geophys. Res. Lett., 33, L14610.
50    </li></ul>
51    
52    <ul><li>
53    G. Gebbie, P. Heimbach and C. Wunsch, 2006:
54    <a href="http://dx.doi.org/10.1029/2005JC003094" target="_blank">
55    Strategies for nested and eddy-resolving state estimation.</a> J. Geophys.
56    Res., 111, C10073.
57    </li></ul>
58    
59    <ul><li>
60    P. Heimbach, R. Ponte, C. Evangelinos, G. Forget, M. Mazloff,
61    D. Menemenlis, S. Vinogradov and C. Wunsch, 2006: <a
62    href="http://earth.esa.int/workshops/venice06/participants/333/paper_333_wunsch.pdf"
63    target="_blank">Combining Altimetric and All Other Data with a General
64    Circulation Model.</a> in: Proceedings of the <a
65    href="http://earth.esa.int/cgi-bin/confalt15y.pl?abstract=333"
66    target="_blank">15 Years of Progress in Radar Altimetry Symposium</a>,
67    Venice, 13-18 March 2006, ESA Special Publication SP-614, ISBN
68    92-9092-925-1. ESA Publications Division, ESTEC, 2200 AG Noordwijk,
69    The Netherlands.
70    </li></ul>
71    
72    <ul><li>
73    E. Hill, D. Enderton, P. Heimbach, and C. Hill, 2006: SPGrid: <a
74    href="http://ecco2.org/manuscripts/2006/gridding_notes.pdf"> A
75    numerical grid generation program for domain decomposed geophysical
76    fluid dynamics models.</a> Unpublished manuscript.
77    </li></ul>
78    
79    <ul><li>
80    N. Krakauer, J. Randerson, F. Primeau, N. Gruber, and D. Menemenlis, 2006: <a
81    href="http://ecco2.org/manuscripts/2006/Nir_gasexchange_06_Tellus.pdf"> Carbon
82    isotope evidence for the latitudinal distribution and wind speed dependence of
83    the air-sea gas transfer velocity.</a> Tellus, 58B, 390-417.
84    </li></ul>
85    
86    <ul><li>
87    R. Kwok, G. Cunningham, H. Zwally, and D. Yi, 2006:
88    <a href="http://dx.doi.org/10.1029/2005JC003175" target="_blank">
89    ICESat over Arctic sea ice: Interpretation of altimetric and reflectivity
90    profiles.</a> J. Geophys. Res., 111.
91    </li></ul>
92    
93    <ul><li>
94    M. Mazloff, 2006: <a
95    href="http://web.mit.edu/mmazloff/Public/msthesis_mazloff.pdf"> Production and
96    analysis of a southern ocean state estimate.</a> Master's thesis,
97    Massachusetts Institute of Technology and the Woods Hole Oceanographic
98    Institution, Cambridge, Massachusetts.
99    </li></ul>
100    
101    <ul><li>
102    U.  Naumann, J. Utke, P. Heimbach, C. Hill, D. Ozyurt, C. Wunsch, M. Fagan, N.
103    Tallent and M. Strout, 2006:
104    <a href="http://sunsite.informatik.rwth-aachen.de/Publications/AIB/2006/2006-05.pdf"
105    target="_blank">Adjoint code by source transformation with OpenAD/F.</a> In:
106    European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006 Eds:
107    P. Wesseling, E. Onate and J. Periaux. Delft, The Netherlands.
108    </li></ul>
109    
110    <ul><li>
111    R. Ponte, 2006:
112    <a href="http://dx.doi.org/10.1175/JPO2843.1" target="_blank">
113    Oceanic response to surface loading effects neglected in
114    volume-conserving models.</a> J. Phys.  Oceanogr., 36, 426-434.
115    </li></ul>
116    
117    <ul><li>
118    D. Stammer, C. Wunsch, and K. Ueyoshi,  2006:
119    <a href="http://dx.doi.org/10.1175/JPO2858.1" target="_blank">
120    Temporal changes in ocean eddy transports.</a>
121    J. Phys. Oceanogr., 36, 543-550.
122    </li></ul>
123    
124    <ul><li>
125    C. Wunsch, 2006: Discrete Inverse and  State Estimation Problems: With
126    Geophysical Fluid Applications. 384p. Cambridge  University Press.
127    </li></ul>
128    
129    <ul><li>
130    C. Wunsch, 2006:
131    <a href="http://ocean.mit.edu/~cwunsch/papersonline/towardswoce.pdf"
132       target="_blank">
133    Towards the  World Ocean Circulation Experiment and a bit of aftermath.</a>
134    in: Physical  Oceanography: Developments since
135    1950. M. Jochum and R. Murtugudde (Eds.),  Springer-Verlag.
136    </li></ul>
137    
138    <ul><li>
139    C. Wunsch,
140    2006: <a href="http://earth.esa.int/workshops/venice06/participants/332/paper_332_wunsch.pdf"
141             target="_blank">Altimetry:  Past, Present, and Future</a> in:
142    Proceedings of
143    the <a href="http://earth.esa.int/cgi-bin/confalt15y.pl?abstract=333"
144           target="_blank">15 Years of  Progress in Radar Altimetry Symposium</a>,
145    Venice, 13-18 March 2006, ESA  Special Publication SP-614, ISBN
146    92-9092-925-1. ESA Publications Division,  ESTEC, 2200 AG Noordwijk, The
147    Netherlands.
148    </li></ul>
149    
150    <ul><li>
151    C. Wunsch and P. Heimbach, 2006:
152    <a href="http://dx.doi.org/10.1175/JPO2957.1" target="_blank">
153    Decadal Changes in the North Atlantic
154    Meridional Overturning and Heat Flux.</a>
155    J. Phys. Oceanogr., 36, 2012-2024.
156    </li></ul>
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