/[MITgcm]/MITgcm_contrib/llc_hires/llc_4320/readme.txt
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revision 1.9 by dimitri, Fri Jan 10 20:52:36 2014 UTC revision 1.10 by dimitri, Sun Jan 12 01:17:21 2014 UTC
# Line 6  qsub -I -q long -l select=300:ncpus=20:m Line 6  qsub -I -q long -l select=300:ncpus=20:m
6    
7  ==============  ==============
8    
9    qsub -I -q R3089666 -l select=1750:model=ivy:aoe=sles11,walltime=04:00:00
10    tcsh
11    cd ~/llc_4320/MITgcm
12    mkdir run
13    lfs setstripe -c -1 run
14    cd run
15    cat $PBS_NODEFILE | awk '{for (i=0;i<20;++i) print $0}' > mynodes
16    setenv PBS_NODEFILE mynodes
17    cp /nobackupp8/chenze/run/mitgcmuv_72x72x29297 .
18    ln -sf /nobackupp8/chenze/run/pickup_seaice_0000000360.meta pickup_seaice.0000000180.meta
19    ln -sf /nobackupp8/chenze/run/pickup_seaice_0000000360.data pickup_seaice.0000000180.data
20    ln -sf /nobackupp8/chenze/run/pickup_0000000360.meta pickup.0000000180.meta
21    ln -sf /nobackupp8/chenze/run/pickup_0000000360.data pickup.0000000180.data
22    ln -sf /nobackup/dmenemen/tarballs/llc_4320/run_template/* .
23    ln -sf /nobackup/dmenemen/forcing/ECMWF_operational/* .
24    cp ../../MITgcm_contrib/llc_hires/llc_4320/input/* .
25    mv data.exch2_72x72x29297 data.exch2
26    module purge
27    module load  comp-intel/2012.0.032 netcdf/4.0
28    module use -a ~kjtaylor/modulefiles
29    module load sles11sp3/mpt-2.10-nasa201311271217
30    setenv MPI_BUFS_PER_PROC 512
31    setenv MPI_REQUEST_MAX 65536
32    setenv MPI_GROUP_MAX 1024
33    setenv MPI_NUM_MEMORY_REGIONS 8
34    setenv MPI_UNBUFFERED_STDIO 1
35    setenv MPI_MEMMAP_OFF 1
36    
37    mpiexec -n 35000 ./mitgcmuv_72x72x29297
38    
39    tail -f STDOUT.00000 | grep advcfl_w
40    
41    ==============
42    
43  cd ~/llc_4320  cd ~/llc_4320
44  cvs co MITgcm_code  cvs co MITgcm_code
45  cvs co MITgcm_contrib/llc_hires/llc_4320  cvs co MITgcm_contrib/llc_hires/llc_4320
# Line 31  mv data.exch2_72x72x29297 data.exch2 Line 65  mv data.exch2_72x72x29297 data.exch2
65  export MPI_NUM_MEMORY_REGIONS=256  export MPI_NUM_MEMORY_REGIONS=256
66  mpiexec -n 35000 ./mitgcmuv_72x72x29297  mpiexec -n 35000 ./mitgcmuv_72x72x29297
67    
68    tail -f STDOUT.00000 | grep advcfl_w
69    
70  ==============  ==============
71    
72  cd ~/llc_4320  cd ~/llc_4320
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